MTR_1g098900 (Medicago truncatula)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 MTR_1g098900 T249454_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.851 0.707
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.851 0.707
AT1G76880
M06970_2.00 		Arabidopsis thaliana
RHRGTAAAAWNDDDWW
WWHHHNWTTTTACYDY		 Dap-seq
OMalley et al.(2016)
AT1G76880_col_a 		0.838 0.707
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES62365 MADF 72 142
AES62365 MADF 466 540

Links

Other MADF family TFs
Other Medicago truncatula TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_04386 Cicer arietinum Ca_04386 I 0.962
PK24122.1 Cannabis sativa PK24122.1 I 0.962
TCM_035565 Theobroma cacao TCM_035565 I 0.961
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.958
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.957
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.957
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.954
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.952
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.952
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.952
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.950
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.950
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.950
29576.m000223 Ricinus communis 29576.m000223 I 0.950
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.950
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.949
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.948
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.948
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.947
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.947
Ca_25135 Cicer arietinum Ca_25135 I 0.946
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.946
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.946
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.946
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.945
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.945
TCM_035571 Theobroma cacao TCM_035571 I 0.943
mgf021983m Mimulus guttatus mgf021983m I 0.943
MDP0000156139 Malus domestica MDP0000156139 I 0.943
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.942
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.942
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.940
Cla001992 Citrullus lanatus Cla001992 I 0.940
Pm022572 Prunus mume Pm022572 I 0.940
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.940
Bo6g083690 Brassica oleracea Bo6g083690 I 0.939
Bra003703 Brassica rapa Bra003703 I 0.939
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.939
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.939
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.939
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.939
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.939
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.938
mgf018892m Mimulus guttatus mgf018892m N 0.938
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.938
MDP0000451107 Malus domestica MDP0000451107 I 0.938
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.937
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.936
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.935
Bo6g120870 Brassica oleracea Bo6g120870 I 0.933
Bra015716 Brassica rapa Bra015716 I 0.933
Bra008285 Brassica rapa Bra008285 I 0.932
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.931
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.931
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.931
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.930
Cla007910 Citrullus lanatus Cla007910 I 0.928
Ca_04385 Cicer arietinum Ca_04385 I 0.927
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.927
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.918
PK26613.1 Cannabis sativa PK26613.1 I 0.917
30206.m000769 Ricinus communis 30206.m000769 I 0.913
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.913
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.913
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.912
Bra003702 Brassica rapa Bra003702 I 0.910
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.910
TCM_001348 Theobroma cacao TCM_001348 I 0.907
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.900
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.899
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.896
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.893
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.893
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.893
Bo8g027460 Brassica oleracea Bo8g027460 I 0.891
Bra036731 Brassica rapa Bra036731 I 0.891
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.891
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.890
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.890
Pm022570 Prunus mume Pm022570 I 0.888
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.888
F775_26337 Aegilops tauschii F775_26337 I 0.887
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.887
mgf015314m Mimulus guttatus mgf015314m N 0.886
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.886
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.886
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.885
OB04G27270 Oryza brachyantha OB04G27270 I 0.884
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.884
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.884
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.883
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.883
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.881
Bo2g091240 Brassica oleracea Bo2g091240 I 0.881
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.881
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.881
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.880
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.880
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.879
OBART04G20290 Oryza barthii OBART04G20290 I 0.879
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.879
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.879
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.879
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.877
TCM_015563 Theobroma cacao TCM_015563 I 0.877
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.877
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.877
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.877
MDP0000701272 Malus domestica MDP0000701272 I 0.877
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.876
mgf004276m Mimulus guttatus mgf004276m I 0.876
Cla005046 Citrullus lanatus Cla005046 I 0.875
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.874
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.873
Si012121m.g Setaria italica Si012121m.g I 0.873
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.873
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.873
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.871
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.871
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.871
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.871
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.871
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N 0.871
Solyc11g005380.1 Solanum lycopersicum Solyc11g005380.1 N 0.871
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.871
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.871
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.870
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.870
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.870
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.870
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.868
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.868
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.866
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.865
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.865
30068.m002635 Ricinus communis 30068.m002635 I 0.865
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.864
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.864
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.864
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.862
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.862
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.862
OBART02G25970 Oryza barthii OBART02G25970 I 0.861
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.861
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.861
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.861
Si034382m.g Setaria italica Si034382m.g I 0.861
Pm024289 Prunus mume Pm024289 I 0.861
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.861
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.858
MDP0000451038 Malus domestica MDP0000451038 I 0.858
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.857
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.857
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.857
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.857
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.856
Si016578m.g Setaria italica Si016578m.g I 0.855
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.854
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.853
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.853
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.852
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N 0.852
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.851
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.851
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.850
OB02G33250 Oryza brachyantha OB02G33250 I 0.850
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.850
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.850
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.850
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.849
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.846
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.846
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.846
Bo6g049430 Brassica oleracea Bo6g049430 I 0.844
Bra040010 Brassica rapa Bra040010 I 0.844
F775_24861 Aegilops tauschii F775_24861 N 0.844
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.844
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.841
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.840
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.840
AT1G76880 Arabidopsis thaliana AT1G76880 D 0.838
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.835
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.831
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.829
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.824
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.823
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.823
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.822
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.815
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.815