Lus10020873.g (Linum usitatissimum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Lus10020873.g T250740_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10020873 MADF 40 111
Lus10020873 MADF 323 394

Links

Other MADF family TFs
Other Linum usitatissimum TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.969
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.906
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.899
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.899
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.899
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.896
Cla001992 Citrullus lanatus Cla001992 I 0.895
30206.m000769 Ricinus communis 30206.m000769 I 0.895
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.895
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.895
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.893
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.892
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.892
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.891
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.891
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.891
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.890
Bo6g083690 Brassica oleracea Bo6g083690 I 0.888
Bo6g120870 Brassica oleracea Bo6g120870 I 0.888
Bra003703 Brassica rapa Bra003703 I 0.888
Bra015716 Brassica rapa Bra015716 I 0.888
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.888
Ca_25135 Cicer arietinum Ca_25135 I 0.888
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.888
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.888
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.888
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.888
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.885
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.885
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.885
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.884
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.883
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.883
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.883
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.882
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.880
PK26613.1 Cannabis sativa PK26613.1 I 0.880
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.879
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.879
Bo2g091240 Brassica oleracea Bo2g091240 I 0.877
Bra008285 Brassica rapa Bra008285 I 0.877
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.877
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.876
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.876
mgf021983m Mimulus guttatus mgf021983m I 0.875
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.874
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.874
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.874
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.874
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.874
TCM_001348 Theobroma cacao TCM_001348 I 0.873
TCM_035565 Theobroma cacao TCM_035565 I 0.873
29576.m000223 Ricinus communis 29576.m000223 I 0.873
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.873
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.873
MDP0000156139 Malus domestica MDP0000156139 I 0.873
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.872
Ca_04385 Cicer arietinum Ca_04385 I 0.870
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.867
MDP0000451107 Malus domestica MDP0000451107 I 0.866
Ca_04386 Cicer arietinum Ca_04386 I 0.865
Cla007910 Citrullus lanatus Cla007910 I 0.865
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.863
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.863
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.863
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.862
mgf018892m Mimulus guttatus mgf018892m N 0.861
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.859
Pm022572 Prunus mume Pm022572 I 0.859
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.858
Bo8g027460 Brassica oleracea Bo8g027460 I 0.855
Bra036731 Brassica rapa Bra036731 I 0.855
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.854
PK24122.1 Cannabis sativa PK24122.1 I 0.854
Pm022570 Prunus mume Pm022570 I 0.852
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.851
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.851
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N 0.850
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.849
TCM_035571 Theobroma cacao TCM_035571 I 0.849
Bra003702 Brassica rapa Bra003702 I 0.842
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.840
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.839
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.837
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.836
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.835
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.832
OB04G27270 Oryza brachyantha OB04G27270 I 0.831
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.831
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.830
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N 0.829
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.828
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.825
OBART04G20290 Oryza barthii OBART04G20290 I 0.825
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.825
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.825
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.825
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.823
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.823
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.823
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.823
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.823
F775_26337 Aegilops tauschii F775_26337 I 0.818
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.818
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.818
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.818
Si012121m.g Setaria italica Si012121m.g I 0.817
mgf015314m Mimulus guttatus mgf015314m N 0.817
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.817
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.816
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.816
Solyc11g005380.1 Solanum lycopersicum Solyc11g005380.1 N 0.815
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.815
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.815
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.812
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.812
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.812
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.812