GLYMA02G09060 (Glycine max)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 GLYMA02G09060 T249094_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G76880
M06970_2.00 		Arabidopsis thaliana
RHRGTAAAAWNDDDWW
WWHHHNWTTTTACYDY		 Dap-seq
OMalley et al.(2016)
AT1G76880_col_a 		0.852 0.725
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.845 0.681
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.845 0.681
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA02G09060.2 MADF 79 149
GLYMA02G09060.2 MADF 468 540

Links

Other MADF family TFs
Other Glycine max TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.966
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.963
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.962
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.962
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.962
Bo6g083690 Brassica oleracea Bo6g083690 I 0.960
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.960
Ca_25135 Cicer arietinum Ca_25135 I 0.960
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.960
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.960
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.960
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.960
Bra003703 Brassica rapa Bra003703 I 0.959
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.959
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.957
Bo6g120870 Brassica oleracea Bo6g120870 I 0.955
Bra008285 Brassica rapa Bra008285 I 0.955
Bra015716 Brassica rapa Bra015716 I 0.955
TCM_035565 Theobroma cacao TCM_035565 I 0.955
Cla001992 Citrullus lanatus Cla001992 I 0.955
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.955
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.955
MDP0000156139 Malus domestica MDP0000156139 I 0.955
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.952
MDP0000451107 Malus domestica MDP0000451107 I 0.952
Ca_04385 Cicer arietinum Ca_04385 I 0.951
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.950
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.950
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.949
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.949
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.949
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.948
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.948
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.948
PK24122.1 Cannabis sativa PK24122.1 I 0.948
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.947
Ca_04386 Cicer arietinum Ca_04386 I 0.947
Pm022572 Prunus mume Pm022572 I 0.947
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.946
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.946
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.945
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.945
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.945
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.945
29576.m000223 Ricinus communis 29576.m000223 I 0.943
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.942
TCM_035571 Theobroma cacao TCM_035571 I 0.941
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.941
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.940
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.939
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.938
mgf021983m Mimulus guttatus mgf021983m I 0.936
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.935
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.935
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.935
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.935
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.934
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.932
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.932
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.932
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.928
30206.m000769 Ricinus communis 30206.m000769 I 0.927
TCM_001348 Theobroma cacao TCM_001348 I 0.926
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.925
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.925
Pm022570 Prunus mume Pm022570 I 0.924
mgf018892m Mimulus guttatus mgf018892m N 0.924
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.924
Bo8g027460 Brassica oleracea Bo8g027460 I 0.922
Bra036731 Brassica rapa Bra036731 I 0.922
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.922
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.918
Cla007910 Citrullus lanatus Cla007910 I 0.918
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.918
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.918
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.907
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.907
Bo2g091240 Brassica oleracea Bo2g091240 I 0.905
PK26613.1 Cannabis sativa PK26613.1 I 0.905
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.903
mgf004276m Mimulus guttatus mgf004276m I 0.902
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.898
MDP0000701272 Malus domestica MDP0000701272 I 0.898
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.897
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.896
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.896
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.896
F775_26337 Aegilops tauschii F775_26337 I 0.895
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.895
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.895
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.892
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.892
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.892
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.892
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.892
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N 0.892
Bra003702 Brassica rapa Bra003702 I 0.891
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.891
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.891
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.891
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.890
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.890
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.890
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.888
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.888
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.888
OB04G27270 Oryza brachyantha OB04G27270 I 0.887
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.887
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.886
TCM_015563 Theobroma cacao TCM_015563 I 0.886
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.885
Cla005046 Citrullus lanatus Cla005046 I 0.885
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.884
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.883
OBART04G20290 Oryza barthii OBART04G20290 I 0.883
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.883
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.883
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.883
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.882
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.882
MDP0000451038 Malus domestica MDP0000451038 I 0.882
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.881
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.881
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.881
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.881
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.881
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.881
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.880
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.879
Si012121m.g Setaria italica Si012121m.g I 0.877
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.877
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.877
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.876
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.875
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.875
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.874
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.874
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.874
30068.m002635 Ricinus communis 30068.m002635 I 0.874
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.874
mgf015314m Mimulus guttatus mgf015314m N 0.873
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.873
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.871
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.871
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.871
Si034382m.g Setaria italica Si034382m.g I 0.871
Pm024289 Prunus mume Pm024289 I 0.871
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.871
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.870
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.870
F775_24861 Aegilops tauschii F775_24861 N 0.868
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.868
OBART02G25970 Oryza barthii OBART02G25970 I 0.867
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.867
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.866
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.866
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.866
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.864
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.864
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.862
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.861
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.861
OB02G33250 Oryza brachyantha OB02G33250 I 0.861
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.861
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N 0.857
Solyc11g005380.1 Solanum lycopersicum Solyc11g005380.1 N 0.857
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.857
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.856
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.856
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.856
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.856
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.855
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.854
AT1G76880 Arabidopsis thaliana AT1G76880 D 0.852
Si016578m.g Setaria italica Si016578m.g I 0.852
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.850
Bo6g049430 Brassica oleracea Bo6g049430 I 0.849
Bra040010 Brassica rapa Bra040010 I 0.849
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.848
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.845
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.845
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.843
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.841
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.841
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.840
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.837
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.837
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.836
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.826
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.824
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.815