PGSC0003DMG400003964 (Solanum tuberosum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 PGSC0003DMG400003964 T249618_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400010112 MADF 70 140
PGSC0003DMT400010112 MADF 384 454
PGSC0003DMT400010113 MADF 1 49
PGSC0003DMT400010113 MADF 292 364

Links

Other MADF family TFs
Other Solanum tuberosum TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc11g005380.1 Solanum lycopersicum Solyc11g005380.1 N 0.965
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.907
Cla007910 Citrullus lanatus Cla007910 I 0.902
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.893
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.888
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.888
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.885
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.885
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.885
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.885
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.881
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.881
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.879
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.879
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.879
30206.m000769 Ricinus communis 30206.m000769 I 0.878
Ca_04386 Cicer arietinum Ca_04386 I 0.877
PK26613.1 Cannabis sativa PK26613.1 I 0.877
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.876
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.875
TCM_035565 Theobroma cacao TCM_035565 I 0.875
mgf021983m Mimulus guttatus mgf021983m I 0.875
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.874
29576.m000223 Ricinus communis 29576.m000223 I 0.873
mgf018892m Mimulus guttatus mgf018892m N 0.873
Bra003702 Brassica rapa Bra003702 I 0.872
Bra008285 Brassica rapa Bra008285 I 0.872
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.872
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.872
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.871
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N 0.870
mgf015314m Mimulus guttatus mgf015314m N 0.869
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.869
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.869
TCM_001348 Theobroma cacao TCM_001348 I 0.868
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.867
PK24122.1 Cannabis sativa PK24122.1 I 0.867
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.866
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.865
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.863
TCM_035571 Theobroma cacao TCM_035571 I 0.863
Bo6g083690 Brassica oleracea Bo6g083690 I 0.862
Bo6g120870 Brassica oleracea Bo6g120870 I 0.862
Bra003703 Brassica rapa Bra003703 I 0.862
Bra015716 Brassica rapa Bra015716 I 0.862
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.862
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.862
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.862
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.862
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.862
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.860
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.857
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.857
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.856
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.856
Ca_25135 Cicer arietinum Ca_25135 I 0.854
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.854
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.854
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.852
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.850
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.850
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.849
Ca_04385 Cicer arietinum Ca_04385 I 0.849
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.849
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.844
Cla001992 Citrullus lanatus Cla001992 I 0.844
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.844
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.842
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.842
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.842
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.841
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.841
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.838
Bo2g091240 Brassica oleracea Bo2g091240 I 0.837
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.836
GSMUA_Achr1G04100_001 Musa acuminata GSMUA_Achr1G04100_001 I 0.830
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.830
MDP0000156139 Malus domestica MDP0000156139 I 0.830
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.829
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.829
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.827
MDP0000451107 Malus domestica MDP0000451107 I 0.826
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.824
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.823
Pm022572 Prunus mume Pm022572 I 0.823
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.820
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.817
Bo8g027460 Brassica oleracea Bo8g027460 I 0.814
Bra036731 Brassica rapa Bra036731 I 0.814