Cucsa.250070 (Cucumis sativus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Cucsa.250070 T250486_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.861 0.676
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.861 0.676
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.250070.1 MADF 59 130
Cucsa.250070.1 MADF 340 412

Links

Other MADF family TFs
Other Cucumis sativus TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla007910 Citrullus lanatus Cla007910 I 0.970
PK26613.1 Cannabis sativa PK26613.1 I 0.946
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.941
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.939
mgf015314m Mimulus guttatus mgf015314m N 0.939
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.939
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.939
Ca_04386 Cicer arietinum Ca_04386 I 0.938
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.937
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.937
TCM_001348 Theobroma cacao TCM_001348 I 0.936
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.935
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.935
29576.m000223 Ricinus communis 29576.m000223 I 0.934
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.934
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.934
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.933
TCM_035565 Theobroma cacao TCM_035565 I 0.932
30206.m000769 Ricinus communis 30206.m000769 I 0.932
mgf021983m Mimulus guttatus mgf021983m I 0.932
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.932
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.931
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.931
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.931
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.929
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.928
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.927
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.927
TCM_035571 Theobroma cacao TCM_035571 I 0.925
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.925
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.925
PK24122.1 Cannabis sativa PK24122.1 I 0.925
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.924
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.922
mgf018892m Mimulus guttatus mgf018892m N 0.922
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.921
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.918
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.918
Ca_25135 Cicer arietinum Ca_25135 I 0.918
Solyc11g005380.1 Solanum lycopersicum Solyc11g005380.1 N 0.916
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.916
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.916
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.916
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.916
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.915
Bo6g083690 Brassica oleracea Bo6g083690 I 0.914
Bo6g120870 Brassica oleracea Bo6g120870 I 0.914
Bo8g027460 Brassica oleracea Bo8g027460 I 0.914
Bra003703 Brassica rapa Bra003703 I 0.914
Bra015716 Brassica rapa Bra015716 I 0.914
Bra036731 Brassica rapa Bra036731 I 0.914
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.914
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.914
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.914
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.914
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.914
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.911
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.911
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.911
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.911
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.911
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.910
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.909
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.908
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N 0.907
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.906
Bra008285 Brassica rapa Bra008285 I 0.905
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.905
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.905
Ca_04385 Cicer arietinum Ca_04385 I 0.905
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.904
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.904
Pm022570 Prunus mume Pm022570 I 0.903
Bra003702 Brassica rapa Bra003702 I 0.901
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.901
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.901
MDP0000156139 Malus domestica MDP0000156139 I 0.901
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.900
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.898
Bo2g091240 Brassica oleracea Bo2g091240 I 0.896
Cla001992 Citrullus lanatus Cla001992 I 0.896
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.896
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.895
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.894
MDP0000451107 Malus domestica MDP0000451107 I 0.893
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.886
Pm022572 Prunus mume Pm022572 I 0.886
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N 0.886
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.885
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.885
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.883
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.881
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.878
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.878
Cla005046 Citrullus lanatus Cla005046 I 0.877
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.873
OB04G27270 Oryza brachyantha OB04G27270 I 0.873
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.873
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.873
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.873
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.873
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.873
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.873
MDP0000451038 Malus domestica MDP0000451038 I 0.873
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.872
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.872
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.872
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.872
OB02G33250 Oryza brachyantha OB02G33250 I 0.869
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.868
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.868
F775_26337 Aegilops tauschii F775_26337 I 0.868
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.868
OBART04G20290 Oryza barthii OBART04G20290 I 0.868
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.868
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.868
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.868
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.868
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.868
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.868
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.868
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.866
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.866
Pm001889 Prunus mume Pm001889 I 0.866
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.865
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.865
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.865
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.865
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.865
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.865
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.865
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.865
Bo6g049430 Brassica oleracea Bo6g049430 I 0.864
Bra040010 Brassica rapa Bra040010 I 0.864
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.864
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.864
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.863
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.863
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.862
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.862
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.862
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.862
Pm024289 Prunus mume Pm024289 I 0.862
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.862
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.862
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.861
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.861
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.861
Si012121m.g Setaria italica Si012121m.g I 0.861
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.861
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.861
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.861
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.859
MDP0000701272 Malus domestica MDP0000701272 I 0.858
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.858
mgf004276m Mimulus guttatus mgf004276m I 0.857
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.856
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.855
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.855
TCM_015563 Theobroma cacao TCM_015563 I 0.855
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.855
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.855
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.855
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.854
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.854
OBART02G25970 Oryza barthii OBART02G25970 I 0.853
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.853
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.850
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.850
Si016578m.g Setaria italica Si016578m.g I 0.850
Si034382m.g Setaria italica Si034382m.g I 0.848
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.848
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.847
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.844
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.843
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.842
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.842
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.841
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.841
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.841
30068.m002635 Ricinus communis 30068.m002635 I 0.841
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.840
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.840
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.840
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.838
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.838
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.836
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.828
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.815