Bra012913 (Brassica rapa)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Bra012913 T245045_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra012913.1-P LOB 2 104

Links

Other LOB family TFs
Other Brassica rapa TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK12240.1 Cannabis sativa PK12240.1 D
Cucsa.031600 Cucumis sativus Cucsa.031600 I
Carubv10020555m.g Capsella rubella Carubv10020555m.g I
Carubv10020487m.g Capsella rubella Carubv10020487m.g I
Carubv10013748m.g Capsella rubella Carubv10013748m.g I
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I
mgf022233m Mimulus guttatus mgf022233m I
Cucsa.238090 Cucumis sativus Cucsa.238090 I
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I
cassava9378.m1 Manihot esculenta cassava9378.m1 I
cassava32886.m1 Manihot esculenta cassava32886.m1 I
cassava16230.m1 Manihot esculenta cassava16230.m1 I
cassava10552.m1 Manihot esculenta cassava10552.m1 I
30174.m008721 Ricinus communis 30174.m008721 I
29738.m001041 Ricinus communis 29738.m001041 I
Pm030202 Prunus mume Pm030202 I
BRC1 Arabidopsis thaliana AT3G18550 I
Cla016709 Citrullus lanatus Cla016709 I
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I
Lus10035055.g Linum usitatissimum Lus10035055.g I
Lus10021713.g Linum usitatissimum Lus10021713.g I
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I
Pm015499 Prunus mume Pm015499 I
GLYMA05G07943 Glycine max GLYMA05G07943 I
ONIVA09G09540 Oryza nivara ONIVA09G09540 I
OMERI09G07770 Oryza meridionalis OMERI09G07770 I
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I
OBART09G10040 Oryza barthii OBART09G10040 I
MTR_4g111935 Medicago truncatula MTR_4g111935 I
MLOC_58142 Hordeum vulgare MLOC_58142 I
LPERR09G06870 Leersia perrieri LPERR09G06870 I
GRMZM2G110242 Zea mays GRMZM2G110242 I
GRMZM2G064628 Zea mays GRMZM2G064628 I
GRMZM2G060319 Zea mays GRMZM2G060319 I
GLYMA17G13065 Glycine max GLYMA17G13065 I
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I
GLYMA04G22407 Glycine max GLYMA04G22407 I
Bra037579 Brassica rapa Bra037579 I
Bra034010 Brassica rapa Bra034010 I
Bra004212 Brassica rapa Bra004212 I
Bra001710 Brassica rapa Bra001710 I
Bo6g099040 Brassica oleracea Bo6g099040 I
Bo3g071560 Brassica oleracea Bo3g071560 I
Bo2g055640 Brassica oleracea Bo2g055640 I
Bo1g117490 Brassica oleracea Bo1g117490 I
BGIOSGA030744 Oryza indica BGIOSGA030744 I
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I
Si033183m.g Setaria italica Si033183m.g I
Si015230m.g Setaria italica Si015230m.g I
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I
Sb07g021140 Sorghum bicolor Sb07g021140 I
Sb02g024450 Sorghum bicolor Sb02g024450 I
TCM_012252 Theobroma cacao TCM_012252 I
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I
OPUNC09G08520 Oryza punctata OPUNC09G08520 I
OS09G0410500 Oryza sativa OS09G0410500 I
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I
Cla018797 Citrullus lanatus Cla018797 N
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N
Cla019282 Citrullus lanatus Cla019282 N
Bo5g117410 Brassica oleracea Bo5g117410 N
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N
BRC1 Arabidopsis lyrata scaffold_302193.1 N
GLYMA06G23410 Glycine max GLYMA06G23410 N
MDP0000224810 Malus domestica MDP0000224810 N
MDP0000219838 Malus domestica MDP0000219838 N
Cucsa.113660 Cucumis sativus Cucsa.113660 N
Cucsa.198860 Cucumis sativus Cucsa.198860 N
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N