mgf003146m (Mimulus guttatus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 mgf003146m T246575_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LOB
M06966_2.00 		Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH
DCCKCCKYHDYYDCCGCCGBN		 Dap-seq
OMalley et al.(2016)
LOB_col_a 		0.828 0.828
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf003146m LOB 17 116

Links

Other LOB family TFs
Other Mimulus guttatus TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LBD6 Arabidopsis thaliana AT1G65620 D 0.727
LOB Arabidopsis thaliana AT5G63090 D 0.828
AC233943.1_FG002 Zea mays AC233943.1_FG002 I 0.798
AMTR_s00066p00120340 Amborella trichopoda AMTR_s00066p00120340 I 0.747
AMTR_s00083p00067130 Amborella trichopoda AMTR_s00083p00067130 I 0.806
LBD25 Arabidopsis thaliana AT3G27650 I 0.818
BGIOSGA002306 Oryza indica BGIOSGA002306 I 0.738
BGIOSGA018046 Oryza indica BGIOSGA018046 I 0.717
Bo2g051420 Brassica oleracea Bo2g051420 I 0.727
Bo2g144870 Brassica oleracea Bo2g144870 I 0.778
Bo2g167820 Brassica oleracea Bo2g167820 I 0.707
Bo3g104760 Brassica oleracea Bo3g104760 I 0.828
Bo7g085860 Brassica oleracea Bo7g085860 I 0.798
Bo9g008330 Brassica oleracea Bo9g008330 I 0.788
Bo9g017470 Brassica oleracea Bo9g017470 I 0.818
Bra025294 Brassica rapa Bra025294 I 0.808
Bra033019 Brassica rapa Bra033019 I 0.778
Bra035860 Brassica rapa Bra035860 I 0.798
Bra038606 Brassica rapa Bra038606 I 0.828
Bra039072 Brassica rapa Bra039072 I 0.788
Bra039733 Brassica rapa Bra039733 I 0.727
BRADI2G04270 Brachypodium distachyon BRADI2G04270 I 0.778
BRADI2G25270 Brachypodium distachyon BRADI2G25270 I 0.707
F775_21760 Aegilops tauschii F775_21760 I 0.717
F775_25656 Aegilops tauschii F775_25656 I 0.788
F775_33210 Aegilops tauschii F775_33210 I 0.753
AS2 Arabidopsis lyrata fgenesh2_kg.2__796__AT1G65620.2 I 0.727
LBD25 Arabidopsis lyrata fgenesh2_kg.5__545__AT3G27650.1 I 0.808
GLYMA04G36080 Glycine max GLYMA04G36080 I 0.818
GLYMA05G02530 Glycine max GLYMA05G02530 I 0.828
GLYMA05G08870 Glycine max GLYMA05G08870 I 0.859
GLYMA06G18861 Glycine max GLYMA06G18861 I 0.818
GLYMA11G17890 Glycine max GLYMA11G17890 I 0.737
GLYMA13G26020 Glycine max GLYMA13G26020 I 0.778
GLYMA15G36310 Glycine max GLYMA15G36310 I 0.778
GLYMA16G07770 Glycine max GLYMA16G07770 I 0.848
GLYMA17G09380 Glycine max GLYMA17G09380 I 0.828
GLYMA19G00390 Glycine max GLYMA19G00390 I 0.859
GLYMA19G12650 Glycine max GLYMA19G12650 I 0.848
GRMZM2G118250 Zea mays GRMZM2G118250 I 0.707
GSMUA_Achr6G04670_001 Musa acuminata GSMUA_Achr6G04670_001 I 0.717
GSMUA_Achr7G23710_001 Musa acuminata GSMUA_Achr7G23710_001 I 0.733
LPERR01G04140 Leersia perrieri LPERR01G04140 I 0.798
MLOC_61156 Hordeum vulgare MLOC_61156 I 0.717
MTR_3g077240 Medicago truncatula MTR_3g077240 I 0.808
MTR_4g105170 Medicago truncatula MTR_4g105170 I 0.818
MTR_6g005070 Medicago truncatula MTR_6g005070 I 0.818
MTR_6g005080 Medicago truncatula MTR_6g005080 I 0.808
MTR_7g033800 Medicago truncatula MTR_7g033800 I 0.859
MTR_8g040900 Medicago truncatula MTR_8g040900 I 0.778
OB01G14220 Oryza brachyantha OB01G14220 I 0.798
OB05G24560 Oryza brachyantha OB05G24560 I 0.717
OBART01G04470 Oryza barthii OBART01G04470 I 0.788
OGLUM01G04900 Oryza glumaepatula OGLUM01G04900 I 0.788
OGLUM05G17630 Oryza glumaepatula OGLUM05G17630 I 0.717
OMERI01G04420 Oryza meridionalis OMERI01G04420 I 0.798
ONIVA01G04930 Oryza nivara ONIVA01G04930 I 0.788
ORGLA01G0040900 Oryza glaberrima ORGLA01G0040900 I 0.788
ORGLA05G0143500 Oryza glaberrima ORGLA05G0143500 I 0.717
ORUFI01G04670 Oryza rufipogon ORUFI01G04670 I 0.788
ORUFI05G17830 Oryza rufipogon ORUFI05G17830 I 0.717
OS01G0169400 Oryza sativa OS01G0169400 I 0.788
OS05G0417000 Oryza sativa OS05G0417000 I 0.717
PGSC0003DMG400000974 Solanum tuberosum PGSC0003DMG400000974 I 0.747
PGSC0003DMG400006914 Solanum tuberosum PGSC0003DMG400006914 I 0.848
PGSC0003DMG400012629 Solanum tuberosum PGSC0003DMG400012629 I 0.869
PGSC0003DMG400018112 Solanum tuberosum PGSC0003DMG400018112 I 0.818
PGSC0003DMG400027078 Solanum tuberosum PGSC0003DMG400027078 I 0.758
POPTR_0001s35280 Populus trichocarpa POPTR_0001s35280 I 0.859
POPTR_0008s07930 Populus trichocarpa POPTR_0008s07930 I 0.737
POPTR_0010s18460 Populus trichocarpa POPTR_0010s18460 I 0.737
POPTR_0012s08540 Populus trichocarpa POPTR_0012s08540 I 0.818
POPTR_0015s09370 Populus trichocarpa POPTR_0015s09370 I 0.818
PRUPE_ppa018381mg Prunus persica PRUPE_ppa018381mg I 0.859
PRUPE_ppa023059mg Prunus persica PRUPE_ppa023059mg I 0.818
PRUPE_ppa027059mg Prunus persica PRUPE_ppa027059mg I 0.737
Sb01g014650 Sorghum bicolor Sb01g014650 I 0.707
Sb03g004590 Sorghum bicolor Sb03g004590 I 0.798
Sb03g042310 Sorghum bicolor Sb03g042310 I 0.707
LOB Arabidopsis lyrata scaffold_802995.1 I 0.828
SELMODRAFT_59324 Selaginella moellendorffii SELMODRAFT_59324 I 0.758
SELMODRAFT_68988 Selaginella moellendorffii SELMODRAFT_68988 I 0.758
Si002599m.g Setaria italica Si002599m.g I 0.707
Si002632m.g Setaria italica Si002632m.g I 0.798
Si024114m.g Setaria italica Si024114m.g I 0.707
Solyc02g067800.2 Solanum lycopersicum Solyc02g067800.2 I 0.848
Solyc02g086480.1 Solanum lycopersicum Solyc02g086480.1 I 0.869
Solyc02g090410.2 Solanum lycopersicum Solyc02g090410.2 I 0.707
Solyc03g063140.2 Solanum lycopersicum Solyc03g063140.2 I 0.747
Solyc03g112430.1 Solanum lycopersicum Solyc03g112430.1 I 0.808
Solyc06g071660.1 Solanum lycopersicum Solyc06g071660.1 I 0.758
Solyc11g008830.1 Solanum lycopersicum Solyc11g008830.1 I 0.737
TCM_012190 Theobroma cacao TCM_012190 I 0.828
TCM_016952 Theobroma cacao TCM_016952 I 0.848
TCM_024217 Theobroma cacao TCM_024217 I 0.727
Traes_1AL_4B89B33E3 Triticum aestivum Traes_1AL_4B89B33E3 I 0.717
Traes_1DL_1290B6A52 Triticum aestivum Traes_1DL_1290B6A52 I 0.769
VIT_00s0215g00010 Vitis vinifera VIT_00s0215g00010 I 0.778
AS2 Vitis vinifera VIT_00s0340g00090 I 0.727
LBD25 Vitis vinifera VIT_14s0066g00680 I 0.859
LOB Vitis vinifera VIT_17s0000g09010 I 0.828
Ca_07463 Cicer arietinum Ca_07463 I 0.798
Ca_08824 Cicer arietinum Ca_08824 I 0.818
Ca_20200 Cicer arietinum Ca_20200 I 0.778
Ca_24372 Cicer arietinum Ca_24372 I 0.848
Cla003499 Citrullus lanatus Cla003499 I 0.778
Cla005851 Citrullus lanatus Cla005851 I 0.727
Cla010600 Citrullus lanatus Cla010600 I 0.859
Cla017388 Citrullus lanatus Cla017388 I 0.848
Cla019510 Citrullus lanatus Cla019510 I 0.828
Pm015649 Prunus mume Pm015649 I 0.859
Pm024312 Prunus mume Pm024312 I 0.818
29917.m001993 Ricinus communis 29917.m001993 I 0.859
29929.m004500 Ricinus communis 29929.m004500 I 0.727
30147.m013890 Ricinus communis 30147.m013890 I 0.828
cassava1141.valid.m1 Manihot esculenta cassava1141.valid.m1 I 0.727
cassava12464.valid.m1 Manihot esculenta cassava12464.valid.m1 I 0.859
cassava16840.m1 Manihot esculenta cassava16840.m1 I 0.707
cassava19770.m1 Manihot esculenta cassava19770.m1 I 0.828
cassava33952.m1 Manihot esculenta cassava33952.m1 I 0.828
cassava3724.m1 Manihot esculenta cassava3724.m1 I 0.818
Cucsa.011300 Cucumis sativus Cucsa.011300 I 0.859
Cucsa.098680 Cucumis sativus Cucsa.098680 I 0.768
Cucsa.178830 Cucumis sativus Cucsa.178830 I 0.727
Cucsa.196600 Cucumis sativus Cucsa.196600 I 0.828
Cucsa.339980 Cucumis sativus Cucsa.339980 I 0.848
gw1.12.172.1 Physcomitrella patens gw1.12.172.1 I 0.727
gw1.170.36.1 Physcomitrella patens gw1.170.36.1 I 0.747
gw1.170.40.1 Physcomitrella patens gw1.170.40.1 I 0.747
gw1.71.84.1 Physcomitrella patens gw1.71.84.1 I 0.737
mgf014755m Mimulus guttatus mgf014755m I 0.737
mgf016361m Mimulus guttatus mgf016361m I 0.788
mgf024603m Mimulus guttatus mgf024603m I 0.818
Aquca_011_00559 Aquilegia coerulea Aquca_011_00559 I 0.798
Aquca_058_00006 Aquilegia coerulea Aquca_058_00006 I 0.737
Aquca_061_00084 Aquilegia coerulea Aquca_061_00084 I 0.828
Bostr.0556s0446 Boechera stricta Bostr.0556s0446 I 0.808
Bostr.0568s0498 Boechera stricta Bostr.0568s0498 I 0.828
Bostr.26959s0351 Boechera stricta Bostr.26959s0351 I 0.727
Cagra.10809s0001 Capsella grandiflora Cagra.10809s0001 I 0.727
Cagra.5118s0045 Capsella grandiflora Cagra.5118s0045 I 0.828
Cagra.5575s0004 Capsella grandiflora Cagra.5575s0004 I 0.818
Carubv10018238m.g Capsella rubella Carubv10018238m.g I 0.818
Carubv10020974m.g Capsella rubella Carubv10020974m.g I 0.727
Carubv10028397m.g Capsella rubella Carubv10028397m.g I 0.828
Ciclev10017006m.g Citrus clementina Ciclev10017006m.g I 0.838
Ciclev10017910m.g Citrus clementina Ciclev10017910m.g I 0.707
Ciclev10022371m.g Citrus clementina Ciclev10022371m.g I 0.818
Eucgr.C02148 Eucalyptus grandis Eucgr.C02148 I 0.737
Eucgr.I01750 Eucalyptus grandis Eucgr.I01750 I 0.848
Eucgr.J02237 Eucalyptus grandis Eucgr.J02237 I 0.859
Eucgr.K02809 Eucalyptus grandis Eucgr.K02809 I 0.808
evm.TU.supercontig_108.62 Carica papaya evm.TU.supercontig_108.62 I 0.848
evm.TU.supercontig_110.17 Carica papaya evm.TU.supercontig_110.17 I 0.828
evm.TU.supercontig_39.110 Carica papaya evm.TU.supercontig_39.110 I 0.727
gene21541-v1.0-hybrid Fragaria vesca gene21541-v1.0-hybrid I 0.737
gene28478-v1.0-hybrid Fragaria vesca gene28478-v1.0-hybrid I 0.848
gene31797-v1.0-hybrid Fragaria vesca gene31797-v1.0-hybrid I 0.848
Gorai.006G033100 Gossypium raimondii Gorai.006G033100 I 0.838
Gorai.007G075700 Gossypium raimondii Gorai.007G075700 I 0.818
Gorai.007G350300 Gossypium raimondii Gorai.007G350300 I 0.727
Gorai.012G063800 Gossypium raimondii Gorai.012G063800 I 0.859
Lus10001139.g Linum usitatissimum Lus10001139.g I 0.707
Lus10013610.g Linum usitatissimum Lus10013610.g I 0.707
Lus10016769.g Linum usitatissimum Lus10016769.g I 0.707
Lus10022264.g Linum usitatissimum Lus10022264.g I 0.859
Lus10022463.g Linum usitatissimum Lus10022463.g I 0.707
Lus10027676.g Linum usitatissimum Lus10027676.g I 0.828
Lus10039940.g Linum usitatissimum Lus10039940.g I 0.828
MDP0000130659 Malus domestica MDP0000130659 I 0.828
MDP0000254288 Malus domestica MDP0000254288 I 0.828
MDP0000273432 Malus domestica MDP0000273432 I 0.737
MDP0000643326 Malus domestica MDP0000643326 I 0.737
MDP0000848210 Malus domestica MDP0000848210 I 0.848
orange1.1g027472m.g Citrus sinensis orange1.1g027472m.g I 0.707
orange1.1g031572m.g Citrus sinensis orange1.1g031572m.g I 0.838
orange1.1g036845m.g Citrus sinensis orange1.1g036845m.g I 0.818
Pavir.Ea03589 Panicum virgatum Pavir.Ea03589 I 0.707
Pavir.Eb00458 Panicum virgatum Pavir.Eb00458 I 0.798
Pavir.J16692 Panicum virgatum Pavir.J16692 I 0.707
Pavir.J22284 Panicum virgatum Pavir.J22284 I 0.707
Pavir.J38993 Panicum virgatum Pavir.J38993 I 0.798
SapurV1A.0011s0490 Salix purpurea SapurV1A.0011s0490 I 0.818
SapurV1A.0093s0490 Salix purpurea SapurV1A.0093s0490 I 0.737
SapurV1A.0164s0090 Salix purpurea SapurV1A.0164s0090 I 0.737
SapurV1A.1247s0030 Salix purpurea SapurV1A.1247s0030 I 0.808
SapurV1A.1328s0080 Salix purpurea SapurV1A.1328s0080 I 0.859
Thhalv10004979m.g Eutrema salsugineum Thhalv10004979m.g I 0.828
Thhalv10005120m.g Eutrema salsugineum Thhalv10005120m.g I 0.818
Thhalv10019572m.g Eutrema salsugineum Thhalv10019572m.g I 0.727
PK13228.1 Cannabis sativa PK13228.1 I 0.703
PK18922.1 Cannabis sativa PK18922.1 I 0.772
PK21510.1 Cannabis sativa PK21510.1 I 0.818
PK26472.1 Cannabis sativa PK26472.1 I 0.859
chr1.CM0171.410.nc Lotus japonicus chr1.CM0171.410.nc I 0.818
chr2.LjT30P12.80.nc Lotus japonicus chr2.LjT30P12.80.nc I 0.818
LjSGA_042891.1 Lotus japonicus LjSGA_042891.1 I 0.869