CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
tshz2
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000016111
T104953_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000020160
C2H2 ZF
202
226
FRCKDCSAAYDTLVELTVHMNKTGH
ENSORLP00000020160
C2H2 ZF
263
287
LKCMFCGHSFDSLQDLSVHMIKTKH
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
189 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30147.m014313
Ricinus communis
30147.m014313
I
0.000
30190.m011120
Ricinus communis
30190.m011120
I
0.000
Aquca_012_00144
Aquilegia coerulea
Aquca_012_00144
I
0.000
Aquca_013_00434
Aquilegia coerulea
Aquca_013_00434
I
0.000
Aquca_013_00435
Aquilegia coerulea
Aquca_013_00435
I
0.000
Aquca_013_00436
Aquilegia coerulea
Aquca_013_00436
I
0.000
Bo9g104770
Brassica oleracea
Bo9g104770
I
0.000
Bostr.15774s0346
Boechera stricta
Bostr.15774s0346
I
0.000
Bostr.7867s0359
Boechera stricta
Bostr.7867s0359
I
0.000
Bostr.7867s0360
Boechera stricta
Bostr.7867s0360
I
0.000
Bostr.7867s0361
Boechera stricta
Bostr.7867s0361
I
0.000
Bra028290
Brassica rapa
Bra028290
I
0.000
BRADI3G51630
Brachypodium distachyon
BRADI3G51630
I
0.000
Cagra.0094s0011
Capsella grandiflora
Cagra.0094s0011
I
0.000
Cagra.2248s0026
Capsella grandiflora
Cagra.2248s0026
I
0.000
Cagra.28753s0001
Capsella grandiflora
Cagra.28753s0001
I
0.000
Carubv10005709m.g
Capsella rubella
Carubv10005709m.g
I
0.000
Carubv10027759m.g
Capsella rubella
Carubv10027759m.g
I
0.000
cassava18935.valid.m1
Manihot esculenta
cassava18935.valid.m1
I
0.000
cassava35062.m1
Manihot esculenta
cassava35062.m1
I
0.000
CBF2
Arabidopsis lyrata
fgenesh2_kg.7__1712__AT4G25470.1
I
0.000
CBF4
Arabidopsis lyrata
scaffold_801637.1
I
0.000
Cla002362
Citrullus lanatus
Cla002362
I
0.000
Cla006315
Citrullus lanatus
Cla006315
I
0.000
Cucsa.166340
Cucumis sativus
Cucsa.166340
I
0.000
Cucsa.251030
Cucumis sativus
Cucsa.251030
I
0.000
DREB1A
Arabidopsis thaliana
AT4G25480
D
0.000
DREB1C
Arabidopsis thaliana
AT4G25470
D
0.000
DREB1D
Arabidopsis thaliana
AT5G51990
D
0.000
DREB1E
Oryza indica
BGIOSGA016950
I
0.000
DREB1E
Oryza sativa
OS04G0572400
D
0.000
DREB1G
Oryza indica
BGIOSGA008804
I
0.000
DREB1G
Oryza sativa
OS02G0677300
D
0.000
Eucgr.D01925
Eucalyptus grandis
Eucgr.D01925
I
0.000
Eucgr.E00529
Eucalyptus grandis
Eucgr.E00529
I
0.000
gene13329-v1.0-hybrid
Fragaria vesca
gene13329-v1.0-hybrid
I
0.000
GLYMA09G27180
Glycine max
GLYMA09G27180
I
0.000
Gorai.007G010100
Gossypium raimondii
Gorai.007G010100
I
0.000
GRMZM2G042756
Zea mays
GRMZM2G042756
I
0.000
GRMZM2G137341
Zea mays
GRMZM2G137341
I
0.000
GSMUA_Achr11G21630_001
Musa acuminata
GSMUA_Achr11G21630_001
I
0.000
GSMUA_Achr8G11980_001
Musa acuminata
GSMUA_Achr8G11980_001
I
0.000
LPERR02G22610
Leersia perrieri
LPERR02G22610
I
0.000
LPERR04G18190
Leersia perrieri
LPERR04G18190
I
0.000
mgf026642m
Mimulus guttatus
mgf026642m
I
0.000
MLOC_75886
Hordeum vulgare
MLOC_75886
I
0.000
MTR_6g465420
Medicago truncatula
MTR_6g465420
I
0.000
MTR_6g465460
Medicago truncatula
MTR_6g465460
I
0.000
MTR_6g465510
Medicago truncatula
MTR_6g465510
I
0.000
MTR_6g465690
Medicago truncatula
MTR_6g465690
I
0.000
MTR_6g466000
Medicago truncatula
MTR_6g466000
I
0.000
OBART02G27760
Oryza barthii
OBART02G27760
I
0.000
OGLUM02G28340
Oryza glumaepatula
OGLUM02G28340
I
0.000
OGLUM04G22260
Oryza glumaepatula
OGLUM04G22260
I
0.000
OMERI02G26980
Oryza meridionalis
OMERI02G26980
I
0.000
OMERI04G18770
Oryza meridionalis
OMERI04G18770
I
0.000
ONIVA02G30790
Oryza nivara
ONIVA02G30790
I
0.000
ONIVA04G20840
Oryza nivara
ONIVA04G20840
I
0.000
OPUNC02G25480
Oryza punctata
OPUNC02G25480
I
0.000
OPUNC04G19970
Oryza punctata
OPUNC04G19970
I
0.000
ORGLA04G0192900
Oryza glaberrima
ORGLA04G0192900
I
0.000
ORUFI02G29230
Oryza rufipogon
ORUFI02G29230
I
0.000
ORUFI04G23890
Oryza rufipogon
ORUFI04G23890
I
0.000
Pavir.Aa00912
Panicum virgatum
Pavir.Aa00912
I
0.000
Pavir.Ab02685
Panicum virgatum
Pavir.Ab02685
I
0.000
Pavir.Ga00931
Panicum virgatum
Pavir.Ga00931
I
0.000
PGSC0003DMG400014309
Solanum tuberosum
PGSC0003DMG400014309
I
0.000
PGSC0003DMG400014310
Solanum tuberosum
PGSC0003DMG400014310
I
0.000
PGSC0003DMG400014311
Solanum tuberosum
PGSC0003DMG400014311
I
0.000
PK23332.1
Cannabis sativa
PK23332.1
I
0.000
POPTR_0001s08710
Populus trichocarpa
POPTR_0001s08710
I
0.000
POPTR_0012s13870
Populus trichocarpa
POPTR_0012s13870
I
0.000
POPTR_0015s13830
Populus trichocarpa
POPTR_0015s13830
I
0.000
PRUPE_ppa010935mg
Prunus persica
PRUPE_ppa010935mg
I
0.000
SapurV1A.0068s0560
Salix purpurea
SapurV1A.0068s0560
I
0.000
Sb04g031950
Sorghum bicolor
Sb04g031950
I
0.000
Sb06g025900
Sorghum bicolor
Sb06g025900
I
0.000
Si011005m.g
Setaria italica
Si011005m.g
I
0.000
Si018262m.g
Setaria italica
Si018262m.g
I
0.000
Solyc03g026270.1
Solanum lycopersicum
Solyc03g026270.1
I
0.000
Solyc03g026280.2
Solanum lycopersicum
Solyc03g026280.2
I
0.000
Solyc03g124110.1
Solanum lycopersicum
Solyc03g124110.1
I
0.000
Thhalv10015252m.g
Eutrema salsugineum
Thhalv10015252m.g
I
0.000
Thhalv10027405m.g
Eutrema salsugineum
Thhalv10027405m.g
I
0.000