Eucgr.D02425 (Eucalyptus grandis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Eucgr.D02425 T257942_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SOC1
M08425_2.00 		Arabidopsis thaliana
CCAAAAAWRGAAAND
HNTTTCYWTTTTTGG		 ChIP-chip
Mathelier et al.(2014)
MA0554.1 		0.958 0.958
SOC1
M10915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL20_01 		0.958 0.958
Q9ATE8_PETHY
M11011_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP21_01 		0.958 0.958
Q9ATE3_PETHY
M11008_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP28_01 		0.958 0.958
Q40591_TOBAC
M11002_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS1_03 		0.958 0.958
MADS50
M10968_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS50_01 		0.958 0.958
Q9ATE9_PETHY
M11012_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP20_01 		0.917 0.917
AGL6
M06986_2.00 		Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW
WWNTTWCYWTTTTDGGWAA		 Dap-seq
OMalley et al.(2016)
AGL6_col_a 		0.896 0.896
MAD17_ORYSJ
M10961_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS17_01 		0.896 0.896
MADS6
M10967_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS6_01 		0.896 0.896
SEP1
M02696_2.00 		Arabidopsis thaliana
NDWNCCAWWWWTRGHAWB
VWTDCYAWWWWTGGNWHN		 SELEX
Mathelier et al.(2014)
MA0584.1 		0.875 0.875
SEP3
M08143_2.00 		Arabidopsis thaliana
CCAAAAAWRGN
NCYWTTTTTGG		 ChIP-seq
Mathelier et al.(2014)
MA0563.1 		0.875 0.875
SEP1
M10929_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL2_01 		0.875 0.875
SEP1
M10930_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL2_02 		0.875 0.875
SEP3
M10902_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL9_01 		0.875 0.875
AGL9_PETHY
M10993_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP2_01 		0.875 0.875
Q9ATE7_PETHY
M11010_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP22_01 		0.875 0.875
Q9ATE6_PETHY
M11009_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP23_01 		0.875 0.875
Q9ATF3_PETHY
M11015_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP4_01 		0.875 0.875
Q9ATF1_PETHY
M11013_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP9_01 		0.875 0.875
O82084_MALDO
M11018_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS1_01 		0.875 0.875
O82699_MALDO
M11022_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS11_01 		0.875 0.875
Q6UGQ8_PETHY
M11005_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS12_01 		0.875 0.875
Q9ST54_MALDO
M11029_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_04 		0.875 0.875
O82697_MALDO
M11020_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS7_01 		0.875 0.875
MADS7
M10975_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS7_02 		0.875 0.875
MADS8
M10976_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS8_01 		0.875 0.875
Q9SBA6_MALDO
M11028_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS8_02 		0.875 0.875
AGL42
M06995_2.00 		Arabidopsis thaliana
RATGATG
CATCATY		 Dap-seq
OMalley et al.(2016)
AGL42_col_a 		0.854 0.854
Q9LEH9_HORVU
M10983_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BM9_01 		0.854 0.854
Q9LM09_TOBAC
M11016_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS4_01 		0.854 0.854
MADS5
M10970_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS5_02 		0.854 0.854
AGL3
M02693_2.00 		Arabidopsis thaliana
VDWNCCAWWWWWRGNWNN
NNWNCYWWWWWTGGNWHB		 SELEX
Mathelier et al.(2014)
MA0001.2 		0.833 0.833
AGL1
M02694_2.00 		Arabidopsis thaliana
NDTDCCWWWWNDGGWAHN
NDTWCCHNWWWWGGHAHN		 SELEX
Mathelier et al.(2014)
MA0585.1 		0.833 0.833
AG
M02695_2.00 		Arabidopsis thaliana
HTTWCCWWAWNDGGHADN
NHTDCCHNWTWWGGWAAD		 SELEX
Mathelier et al.(2014)
MA0005.2 		0.833 0.833
AG
M10923_2.00 		Arabidopsis thaliana
HTTWCCWWAWNDGGHWDN
NHTDCCHNWTWWGGWAAD		 Transfac
Matys et al.(2006)
P$AG_01 		0.833 0.833
AG
M10924_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_02 		0.833 0.833
AG
M10925_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_03 		0.833 0.833
AG_TOBAC
M10995_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG1_02 		0.833 0.833
AGL1
M10920_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL1_01 		0.833 0.833
AGL1
M10921_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL1_02 		0.833 0.833
AGL3
M10908_2.00 		Arabidopsis thaliana
VDWNCCAWWWWWRGNWNN
NNWNCYWWWWWTGGNWHB		 Transfac
Matys et al.(2006)
P$AGL3_01 		0.833 0.833
AGL3
M10909_2.00 		Arabidopsis thaliana
NDTNCCAWWWWTRGHWNN
NNWDCYAWWWWTGGNAHN		 Transfac
Matys et al.(2006)
P$AGL3_02 		0.833 0.833
AGL3
M10910_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL3_03 		0.833 0.833
SEP2
M10916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL4_01 		0.833 0.833
AG
M10926_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_Q2 		0.833 0.833
Q9LEI1_HORVU
M10984_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BM7_01 		0.833 0.833
Q9ATF2_PETHY
M11014_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP5_01 		0.833 0.833
Q08711_PETHY
M10999_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP6_01 		0.833 0.833
MADS1
M10969_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS1_02 		0.833 0.833
Q8VWZ3_MALDO
M11025_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS14_02 		0.833 0.833
Q8VWZ2_MALDO
M11024_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS15_02 		0.833 0.833
MADS3_ORYSJ
M10963_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_01 		0.833 0.833
AG_PETHY
M10994_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_02 		0.833 0.833
Solyc05g012020.2
M10986_2.00 		Solanum lycopersicum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RIN_01 		0.833 0.833
Solyc05g012020.2
M10987_2.00 		Solanum lycopersicum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RIN_Q2_01 		0.833 0.833
Solyc05g012020.2
M10988_2.00 		Solanum lycopersicum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RIN_Q2 		0.833 0.833
SHP2
M10914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SHP2_01 		0.833 0.833
AGL13
M06989_2.00 		Arabidopsis thaliana
WTWCYHAAAAWRGWAADW
WHTTWCYWTTTTDRGWAW		 Dap-seq
OMalley et al.(2016)
AGL13_col_b 		0.812 0.812
AGL15
M06992_2.00 		Arabidopsis thaliana
WNTTWCCHAAWDWRGAAAN
NTTTCYWHWTTDGGWAANW		 Dap-seq
OMalley et al.(2016)
AGL15_col_a 		0.812 0.812
AGL15
M06993_2.00 		Arabidopsis thaliana
DNTTWCCHAAWDDRGAAANHH
DDNTTTCYHHWTTDGGWAANH		 Dap-seq
OMalley et al.(2016)
AGL15_colamp_a 		0.812 0.812
AGL15
M10927_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL15_01 		0.812 0.812
AGL15
M10928_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL15_02 		0.812 0.812
MLOC_61901
M10964_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BM8_01 		0.812 0.812
O82698_MALDO
M11021_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS10_01 		0.812 0.812
MAD14_ORYSJ
M10960_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS14_01 		0.812 0.812
MADS15
M10972_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS15_01 		0.812 0.812
MADS18
M10973_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS18_01 		0.812 0.812
Q9FR84_MAIZE
M10981_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_03 		0.812 0.812
Q84LI3_WHEAT
M10979_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAVRT1_01 		0.812 0.812
O82128_WHEAT
M10965_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WAP1_01 		0.812 0.812
Q41829_MAIZE
M10977_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ZAP1_02 		0.812 0.812
SVP
M06984_2.00 		Arabidopsis thaliana
DDCCVAAWANGGHAA
TTDCCNTWTTBGGHH		 Dap-seq
OMalley et al.(2016)
SVP_colamp_v3b 		0.792 0.792
SVP
M06985_2.00 		Arabidopsis thaliana
CCMAAWANGGWAANW
WNTTWCCNTWTTKGG		 Dap-seq
OMalley et al.(2016)
SVP_col_v3b 		0.792 0.792
squamosa
M02697_2.00 		Antirrhinum majus
MYAWAWAWRGHAAN
NTTDCYWTWTWTRK		 SELEX
Mathelier et al.(2014)
MA0082.1 		0.792 0.792
SVP
M08424_2.00 		Arabidopsis thaliana
NWWHCCMAAAADGGAAARHH
DDYTTTCCHTTTTKGGDWWN		 ChIP-chip
Mathelier et al.(2014)
MA0555.1 		0.792 0.792
Q9LEI3_HORVU
M10985_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BM3_01 		0.792 0.792
Q40882_PETHY
M11003_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP11_01 		0.792 0.792
Q38742_ANTMA
M11000_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SQUA_01 		0.792 0.792
AGL16
M06987_2.00 		Arabidopsis thaliana
TWCCHAAWDDGGWAA
TTWCCHHWTTDGGWA		 Dap-seq
OMalley et al.(2016)
AGL16_col_a 		0.771 0.771
AGL16
M06988_2.00 		Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS
STTTCCHWWTWDGGWAANWHW		 Dap-seq
OMalley et al.(2016)
AGL16_colamp_a 		0.771 0.771
FBP24_PETHY
M10997_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP24_01 		0.771 0.771
Q9ATE2_PETHY
M11007_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP29_01 		0.771 0.771
Q43616_PETHY
M11004_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP7_01 		0.771 0.771
Q7X9I6_MALDO
M11023_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS12_02 		0.771 0.771
Q9ZRA5_MALDO
M11030_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_04 		0.771 0.771
AP1
M08144_2.00 		Arabidopsis thaliana
MYAAAAAWRGAAA
TTTCYWTTTTTRK		 ChIP-seq
Mathelier et al.(2014)
MA0940.1 		0.750 0.750
A1YJE4_HORVD
M10900_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BM10_01 		0.750 0.750
Q8GT99_TOBAC
M11006_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS11_02 		0.750 0.750
O82695_MALDO
M11019_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS5_01 		0.750 0.750
AP1
M10905_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADSA_Q2 		0.750 0.750
Q9SBQ1_PETHY
M11017_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PFG_01 		0.750 0.750
FLC
M06990_2.00 		Arabidopsis thaliana
WWDMYNDWWWWGGAAASW
WSTTTCCWWWWHNRKHWW		 Dap-seq
OMalley et al.(2016)
AGL25_col_a 		0.729 0.729
FLC
M06991_2.00 		Arabidopsis thaliana
WCYHAAAAWGGAAAS
STTTCCWTTTTDRGW		 Dap-seq
OMalley et al.(2016)
AGL25_colamp_a 		0.729 0.729
FLC
M08147_2.00 		Arabidopsis thaliana
NNWWDCYVAAAWWRGAAAVHH
DDBTTTCYWWTTTBRGHWWNN		 ChIP-seq
Mathelier et al.(2014)
MA0558.1 		0.729 0.729
AGL12
M10906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL12_01 		0.729 0.729
MADS2
M10966_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_02 		0.729 0.729
Q9FVN1_MAIZE
M10982_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_03 		0.729 0.729
Q40513_TOBAC
M11001_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DEF_01 		0.708 0.708
M17_MAIZE
M10959_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$M17_01 		0.708 0.708
Q9AR49_MAIZE
M10980_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$M29_01 		0.708 0.708
MADS16
M10971_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS16_01 		0.708 0.708
MAD55_ORYSJ
M10962_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS55_01 		0.708 0.708
Q4U0F1_WHEAT
M10978_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAVRT2_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.D02425.1 MADS box 45 92

Links

Other MADS box family TFs
Other Eucalyptus grandis TFs

2103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30032.m000462 Ricinus communis 30032.m000462 N
30068.m002615 Ricinus communis 30068.m002615 I
30076.m004471 Ricinus communis 30076.m004471 I
AC216872.3_FG002 Zea mays AC216872.3_FG002 N
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I
ARF31 Arabidopsis thaliana AT2G36080 N
AT3G11580 Arabidopsis thaliana AT3G11580 N
AT5G06250 Arabidopsis thaliana AT5G06250 N
BGIOSGA005835 Oryza indica BGIOSGA005835 N
BGIOSGA011738 Oryza indica BGIOSGA011738 N
BGIOSGA014498 Oryza indica BGIOSGA014498 I
BGIOSGA028020 Oryza indica BGIOSGA028020 N
BGIOSGA031489 Oryza indica BGIOSGA031489 N
BGIOSGA034469 Oryza indica BGIOSGA034469 N
Bo01079s020 Brassica oleracea Bo01079s020 N
Bo3g001110 Brassica oleracea Bo3g001110 N
Bo3g039420 Brassica oleracea Bo3g039420 N
Bo4g006900 Brassica oleracea Bo4g006900 N
Bo4g035110 Brassica oleracea Bo4g035110 N
Bo4g099000 Brassica oleracea Bo4g099000 N
Bo4g197410 Brassica oleracea Bo4g197410 I
Bo5g002790 Brassica oleracea Bo5g002790 N
Bo5g136360 Brassica oleracea Bo5g136360 N
Bo6g079210 Brassica oleracea Bo6g079210 N
Bo8g097490 Brassica oleracea Bo8g097490 N
Bo9g176470 Brassica oleracea Bo9g176470 N
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N
Bostr.7365s0004 Boechera stricta Bostr.7365s0004 I
Bra000434 Brassica rapa Bra000434 N
Bra003482 Brassica rapa Bra003482 N
Bra004501 Brassica rapa Bra004501 N
Bra005301 Brassica rapa Bra005301 N
Bra007646 Brassica rapa Bra007646 N
Bra014415 Brassica rapa Bra014415 N
Bra017262 Brassica rapa Bra017262 N
Bra030497 Brassica rapa Bra030497 N
Bra033294 Brassica rapa Bra033294 N
Bra034828 Brassica rapa Bra034828 N
Bra040478 Brassica rapa Bra040478 I
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N
BRADI3G16500 Brachypodium distachyon BRADI3G16500 N
BRADI3G32140 Brachypodium distachyon BRADI3G32140 N
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I
Carubv10001689m.g Capsella rubella Carubv10001689m.g I
Carubv10009540m.g Capsella rubella Carubv10009540m.g N
Carubv10014376m.g Capsella rubella Carubv10014376m.g N
Carubv10017696m.g Capsella rubella Carubv10017696m.g I
Carubv10023656m.g Capsella rubella Carubv10023656m.g N
Carubv10023925m.g Capsella rubella Carubv10023925m.g N
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I
cassava39049.m1 Manihot esculenta cassava39049.m1 I
cassava3990.m1 Manihot esculenta cassava3990.m1 N
Ca_00826 Cicer arietinum Ca_00826 N
Ca_01368 Cicer arietinum Ca_01368 I
Ca_25633 Cicer arietinum Ca_25633 I
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I
Cla005055 Citrullus lanatus Cla005055 N
Cla006845 Citrullus lanatus Cla006845 I
Cla014858 Citrullus lanatus Cla014858 N
Cla017937 Citrullus lanatus Cla017937 I
Cucsa.106780 Cucumis sativus Cucsa.106780 N
Cucsa.193290 Cucumis sativus Cucsa.193290 I
Cucsa.241440 Cucumis sativus Cucsa.241440 I
Cucsa.349830 Cucumis sativus Cucsa.349830 N
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I
F775_02500 Aegilops tauschii F775_02500 N
F775_04153 Aegilops tauschii F775_04153 N
F775_31255 Aegilops tauschii F775_31255 N
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I
GLYMA02G36090 Glycine max GLYMA02G36090 I
GLYMA03G35700 Glycine max GLYMA03G35700 N
GLYMA03G42301 Glycine max GLYMA03G42301 I
GLYMA07G05381 Glycine max GLYMA07G05381 I
GLYMA10G08871 Glycine max GLYMA10G08871 I
GLYMA16G01951 Glycine max GLYMA16G01951 I
GLYMA19G38340 Glycine max GLYMA19G38340 N
GLYMA19G45090 Glycine max GLYMA19G45090 I
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N
GRMZM2G018336 Zea mays GRMZM2G018336 I
GRMZM2G018485 Zea mays GRMZM2G018485 N
GRMZM2G024948 Zea mays GRMZM2G024948 N
GRMZM2G065538 Zea mays GRMZM2G065538 I
GRMZM2G098443 Zea mays GRMZM2G098443 N
GRMZM2G102059 Zea mays GRMZM2G102059 N
GRMZM2G125095 Zea mays GRMZM2G125095 N
GRMZM2G142999 Zea mays GRMZM2G142999 N
GRMZM2G328742 Zea mays GRMZM2G328742 N
GRMZM5G805685 Zea mays GRMZM5G805685 N
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I
GSMUA_Achr4G30170_001 Musa acuminata GSMUA_Achr4G30170_001 N
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I
LPERR02G22870 Leersia perrieri LPERR02G22870 I
LPERR03G01560 Leersia perrieri LPERR03G01560 N
LPERR04G18630 Leersia perrieri LPERR04G18630 N
LPERR06G00460 Leersia perrieri LPERR06G00460 N
LPERR07G08550 Leersia perrieri LPERR07G08550 N
LPERR08G03490 Leersia perrieri LPERR08G03490 N
LPERR10G12990 Leersia perrieri LPERR10G12990 N
LPERR11G03050 Leersia perrieri LPERR11G03050 N
Lus10004226.g Linum usitatissimum Lus10004226.g N
Lus10021326.g Linum usitatissimum Lus10021326.g N
Lus10034276.g Linum usitatissimum Lus10034276.g I
MDP0000128295 Malus domestica MDP0000128295 N
MDP0000138163 Malus domestica MDP0000138163 N
MDP0000229742 Malus domestica MDP0000229742 N
MDP0000288808 Malus domestica MDP0000288808 N
mgf018965m Mimulus guttatus mgf018965m N
mgf019085m Mimulus guttatus mgf019085m N
mgf023686m Mimulus guttatus mgf023686m I
mgf023769m Mimulus guttatus mgf023769m N
MLOC_11014 Hordeum vulgare MLOC_11014 N
MLOC_38822 Hordeum vulgare MLOC_38822 I
MLOC_44012 Hordeum vulgare MLOC_44012 I
MLOC_47091 Hordeum vulgare MLOC_47091 N
MLOC_48938 Hordeum vulgare MLOC_48938 N
MLOC_56530 Hordeum vulgare MLOC_56530 N
MLOC_66387 Hordeum vulgare MLOC_66387 I
MLOC_74058 Hordeum vulgare MLOC_74058 N
MTR_1g058350 Medicago truncatula MTR_1g058350 N
MTR_7g105370 Medicago truncatula MTR_7g105370 N
MTR_7g117455 Medicago truncatula MTR_7g117455 I
MTR_8g023990 Medicago truncatula MTR_8g023990 I
NGA1 Arabidopsis thaliana AT2G46870 N
NGA2 Arabidopsis thaliana AT3G61970 N
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N
NGA3 Arabidopsis thaliana AT1G01030 N
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N
NGA4 Arabidopsis lyrata scaffold_604140.1 I
OB01G36520 Oryza brachyantha OB01G36520 I
OB02G35380 Oryza brachyantha OB02G35380 I
OB03G11610 Oryza brachyantha OB03G11610 N
OB05G32250 Oryza brachyantha OB05G32250 I
OB10G24100 Oryza brachyantha OB10G24100 N
OB11G12920 Oryza brachyantha OB11G12920 N
OB12G13420 Oryza brachyantha OB12G13420 N
OBART02G28100 Oryza barthii OBART02G28100 N
OBART02G28110 Oryza barthii OBART02G28110 N
OBART03G01650 Oryza barthii OBART03G01650 N
OBART04G22880 Oryza barthii OBART04G22880 I
OBART08G03440 Oryza barthii OBART08G03440 N
OBART10G17010 Oryza barthii OBART10G17010 N
OBART11G03590 Oryza barthii OBART11G03590 N
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I
OGLUM08G03520 Oryza glumaepatula OGLUM08G03520 N
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N
OLONG_000415 Oryza longistaminata OLONG_000415 I
OLONG_005139 Oryza longistaminata OLONG_005139 N
OLONG_010584 Oryza longistaminata OLONG_010584 I
OLONG_022770 Oryza longistaminata OLONG_022770 N
OMERI02G27240 Oryza meridionalis OMERI02G27240 N
OMERI03G01600 Oryza meridionalis OMERI03G01600 N
OMERI08G03480 Oryza meridionalis OMERI08G03480 N
OMERI10G13480 Oryza meridionalis OMERI10G13480 N
OMERI11G03310 Oryza meridionalis OMERI11G03310 N
OMERI12G01740 Oryza meridionalis OMERI12G01740 N
ONIVA02G30750 Oryza nivara ONIVA02G30750 N
ONIVA04G22030 Oryza nivara ONIVA04G22030 I
ONIVA07G22860 Oryza nivara ONIVA07G22860 N
ONIVA08G03420 Oryza nivara ONIVA08G03420 N
ONIVA10G18740 Oryza nivara ONIVA10G18740 N
ONIVA12G15340 Oryza nivara ONIVA12G15340 N
OPUNC02G25780 Oryza punctata OPUNC02G25780 N
OPUNC03G01540 Oryza punctata OPUNC03G01540 N
OPUNC04G20430 Oryza punctata OPUNC04G20430 I
OPUNC06G00440 Oryza punctata OPUNC06G00440 N
OPUNC07G09160 Oryza punctata OPUNC07G09160 N
OPUNC08G03290 Oryza punctata OPUNC08G03290 N
OPUNC10G16940 Oryza punctata OPUNC10G16940 N
OPUNC11G03320 Oryza punctata OPUNC11G03320 N
OPUNC12G03300 Oryza punctata OPUNC12G03300 N
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I
ORGLA08G0028800 Oryza glaberrima ORGLA08G0028800 N
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I
ORUFI08G03850 Oryza rufipogon ORUFI08G03850 N
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N
OS02G0683500 Oryza sativa OS02G0683500 N
OS03G0120900 Oryza sativa OS03G0120900 N
OS04G0581400 Oryza sativa OS04G0581400 I
OS08G0157700 Oryza sativa OS08G0157700 N
OS10G0537100 Oryza sativa OS10G0537100 N
OS11G0156000 Oryza sativa OS11G0156000 N
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N
Pavir.Ea00485 Panicum virgatum Pavir.Ea00485 I
Pavir.Fb00403 Panicum virgatum Pavir.Fb00403 N
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N
Pavir.J06582 Panicum virgatum Pavir.J06582 N
Pavir.J27608 Panicum virgatum Pavir.J27608 N
Pavir.J35382 Panicum virgatum Pavir.J35382 N
Pavir.J38226 Panicum virgatum Pavir.J38226 N
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I
PK04952.1 Cannabis sativa PK04952.1 I
PK11025.1 Cannabis sativa PK11025.1 I
PK21157.1 Cannabis sativa PK21157.1 I
Pm024248 Prunus mume Pm024248 I
Pm028725 Prunus mume Pm028725 N
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N
Sb01g030520 Sorghum bicolor Sb01g030520 N
Sb01g049150 Sorghum bicolor Sb01g049150 N
Sb04g031710 Sorghum bicolor Sb04g031710 N
Sb05g003450 Sorghum bicolor Sb05g003450 N
Sb06g026370 Sorghum bicolor Sb06g026370 N
Sb08g003550 Sorghum bicolor Sb08g003550 N
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N
SELMODRAFT_59317 Selaginella moellendorffii SELMODRAFT_59317 N
SELMODRAFT_59628 Selaginella moellendorffii SELMODRAFT_59628 N
Si010849m.g Setaria italica Si010849m.g N
Si011823m.g Setaria italica Si011823m.g N
Si014362m.g Setaria italica Si014362m.g N
Si020241m.g Setaria italica Si020241m.g N
Si027632m.g Setaria italica Si027632m.g N
Si036864m.g Setaria italica Si036864m.g N
Si039972m.g Setaria italica Si039972m.g N
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N
TCM_005014 Theobroma cacao TCM_005014 I
TCM_015590 Theobroma cacao TCM_015590 I
TCM_022729 Theobroma cacao TCM_022729 N
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I
Traes_1BL_B8B4C1FB6 Triticum aestivum Traes_1BL_B8B4C1FB6 I
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I
Traes_2AL_25382F498 Triticum aestivum Traes_2AL_25382F498 N
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N
Traes_2DL_2D1980C7B Triticum aestivum Traes_2DL_2D1980C7B N
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I
Traes_4AL_445A910EB Triticum aestivum Traes_4AL_445A910EB N
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I
TRIUR3_01515 Triticum urartu TRIUR3_01515 N
TRIUR3_06598 Triticum urartu TRIUR3_06598 N
TRIUR3_24950 Triticum urartu TRIUR3_24950 I
TRIUR3_29732 Triticum urartu TRIUR3_29732 N
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I