GRMZM2G475305 (Zea mays)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 GRMZM2G475305 T320115_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.918 0.918
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G475305_P01 RWP-RK 573 621

Links

Other RWP-RK family TFs
Other Zea mays TFs

415 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0003_569 Arabidopsis lyrata Al_scaffold_0003_569 I
Aquca_007_00647 Aquilegia coerulea Aquca_007_00647 I
AT3G05860 Arabidopsis thaliana AT3G05860 I
Bo5g145010 Brassica oleracea Bo5g145010 N
Bo9g078450 Brassica oleracea Bo9g078450 I
Bostr.2392s0039 Boechera stricta Bostr.2392s0039 I
Bra029469 Brassica rapa Bra029469 I
Bra039404 Brassica rapa Bra039404 N
Carubv10001920m.g Capsella rubella Carubv10001920m.g N
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I
Cla009163 Citrullus lanatus Cla009163 I
Cucsa.224270 Cucumis sativus Cucsa.224270 I
Eucgr.E01736 Eucalyptus grandis Eucgr.E01736 I
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I
evm.TU.contig_25253.1 Carica papaya evm.TU.contig_25253.1 N
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I
evm.TU.contig_28089 Carica papaya evm.TU.contig_28089 I
evm.TU.contig_28448.1 Carica papaya evm.TU.contig_28448.1 N
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I
evm.TU.contig_35265 Carica papaya evm.TU.contig_35265 I
evm.TU.contig_35868 Carica papaya evm.TU.contig_35868 N
evm.TU.contig_37084 Carica papaya evm.TU.contig_37084 I
evm.TU.contig_38146 Carica papaya evm.TU.contig_38146 I
evm.TU.contig_38760 Carica papaya evm.TU.contig_38760 N
evm.TU.contig_40485 Carica papaya evm.TU.contig_40485 I
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I
evm.TU.supercontig_100.9 Carica papaya evm.TU.supercontig_100.9 N
evm.TU.supercontig_117.19 Carica papaya evm.TU.supercontig_117.19 I
evm.TU.supercontig_118.30 Carica papaya evm.TU.supercontig_118.30 I
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I
evm.TU.supercontig_1256.1 Carica papaya evm.TU.supercontig_1256.1 N
evm.TU.supercontig_1750.1 Carica papaya evm.TU.supercontig_1750.1 I
evm.TU.supercontig_185.12 Carica papaya evm.TU.supercontig_185.12 I
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I
evm.TU.supercontig_265.6 Carica papaya evm.TU.supercontig_265.6 N
evm.TU.supercontig_30.164 Carica papaya evm.TU.supercontig_30.164 N
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I
gene23924-v1.0-hybrid Fragaria vesca gene23924-v1.0-hybrid I
Gorai.004G054700 Gossypium raimondii Gorai.004G054700 N
Gorai.004G229600 Gossypium raimondii Gorai.004G229600 N
Gorai.004G229700 Gossypium raimondii Gorai.004G229700 N
Gorai.013G168300 Gossypium raimondii Gorai.013G168300 I
Gorai.013G210200 Gossypium raimondii Gorai.013G210200 I
Gorai.013G210600 Gossypium raimondii Gorai.013G210600 N
Gorai.013G210700 Gossypium raimondii Gorai.013G210700 N
GSMUA_Achr2G18400_001 Musa acuminata GSMUA_Achr2G18400_001 N
LjT04G17.30.nc Lotus japonicus LjT04G17.30.nc N
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I
Lus10014578.g Linum usitatissimum Lus10014578.g I
Lus10032108.g Linum usitatissimum Lus10032108.g I
MDP0000152718 Malus domestica MDP0000152718 I
MDP0000159587 Malus domestica MDP0000159587 I
MDP0000236438 Malus domestica MDP0000236438 N
MDP0000451827 Malus domestica MDP0000451827 N
MDP0000925348 Malus domestica MDP0000925348 I
MTR_3g466980 Medicago truncatula MTR_3g466980 N
MTR_4g031910 Medicago truncatula MTR_4g031910 N
PDK_20s1688321g001 Phoenix dactylifera PDK_20s1688321g001 N
Pm007730 Prunus mume Pm007730 N
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I
PRUPE_ppa022382mg Prunus persica PRUPE_ppa022382mg N
PRUPE_ppa022799mg Prunus persica PRUPE_ppa022799mg N
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I
TCM_025671 Theobroma cacao TCM_025671 I
TCM_026842 Theobroma cacao TCM_026842 I
Thhalv10012000m.g Eutrema salsugineum Thhalv10012000m.g I
Thhalv10024162m.g Eutrema salsugineum Thhalv10024162m.g I
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I