AMTR_s00018p00040300 (Amborella trichopoda)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 AMTR_s00018p00040300 T018341_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN08103 B3 17 122

Links

Other B3 family TFs
Other Amborella trichopoda TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.964
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.838
OB04G29740 Oryza brachyantha OB04G29740 I 0.833
30068.m002615 Ricinus communis 30068.m002615 I 0.822
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.822
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.822
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.822
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.822
Pm028725 Prunus mume Pm028725 N 0.812
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.812
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.812
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.808
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.802
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.802
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.802
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.800
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.798
Cla005055 Citrullus lanatus Cla005055 N 0.796
MLOC_48938 Hordeum vulgare MLOC_48938 N 0.795
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.792
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.792
OBART03G01650 Oryza barthii OBART03G01650 N 0.792
OS03G0120900 Oryza sativa OS03G0120900 N 0.792
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.792
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.792
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.792
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.792
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.792
TCM_015590 Theobroma cacao TCM_015590 I 0.792
OB03G11610 Oryza brachyantha OB03G11610 N 0.792
Si036864m.g Setaria italica Si036864m.g N 0.792
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.792
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.792
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.792
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.792
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.792
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.792
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.792
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.792
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.792
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.792
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.791
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.782
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.782
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.782
OBART10G17010 Oryza barthii OBART10G17010 N 0.782
OBART04G22880 Oryza barthii OBART04G22880 I 0.782
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.782
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.782
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.782
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.782
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.782
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.782
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.782
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.782
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.782
Si011823m.g Setaria italica Si011823m.g N 0.782
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.782
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.782
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.782
OS04G0581400 Oryza sativa OS04G0581400 I 0.782
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.782
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.782
Pm024248 Prunus mume Pm024248 I 0.782
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.782
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.782
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.782
OS10G0537100 Oryza sativa OS10G0537100 N 0.782
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.782
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.782
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.782
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.782
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.782
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.782
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.782
OB10G24100 Oryza brachyantha OB10G24100 N 0.782
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.780
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.780
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.773
Si020241m.g Setaria italica Si020241m.g N 0.772
TCM_005014 Theobroma cacao TCM_005014 I 0.772
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.772
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.772
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.772
30076.m004471 Ricinus communis 30076.m004471 I 0.772
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.772
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.772
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.772
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.772
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.772
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.772
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.772
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.770
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.762
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.762
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.762
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.762
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.762
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.762
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.762
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.762
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.762
mgf023769m Mimulus guttatus mgf023769m N 0.762
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.762
OB02G35380 Oryza brachyantha OB02G35380 I 0.762
Bra040478 Brassica rapa Bra040478 I 0.760
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.758
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.752
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.752
PK11025.1 Cannabis sativa PK11025.1 I 0.752
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.752
Bo3g039420 Brassica oleracea Bo3g039420 N 0.752
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.752
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.752
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N 0.752
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.752
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.752
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.752
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.752
Cla006845 Citrullus lanatus Cla006845 I 0.752
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.752
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.752
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.750
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.750
Bo4g197410 Brassica oleracea Bo4g197410 I 0.750
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.750
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.750
NGA1 Arabidopsis thaliana AT2G46870 N 0.750
AC216872.3_FG002 Zea mays AC216872.3_FG002 N 0.750
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.750
OLONG_010584 Oryza longistaminata OLONG_010584 I 0.745
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.743
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.743
Bra007646 Brassica rapa Bra007646 N 0.743
Bra000434 Brassica rapa Bra000434 N 0.743
OS02G0683500 Oryza sativa OS02G0683500 N 0.743
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.743
Ca_01368 Cicer arietinum Ca_01368 I 0.743
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.743
Bra014415 Brassica rapa Bra014415 N 0.743
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.743
OBART02G28100 Oryza barthii OBART02G28100 N 0.743
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.743
PK21157.1 Cannabis sativa PK21157.1 I 0.743
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.743
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.743
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.743
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.743
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.743
Bo8g097490 Brassica oleracea Bo8g097490 N 0.743
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.743
SELMODRAFT_59317 Selaginella moellendorffii SELMODRAFT_59317 N 0.741
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.741
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.737
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.737
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.733
Bo4g006900 Brassica oleracea Bo4g006900 N 0.733
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.733
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.733
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.733
NGA2 Arabidopsis thaliana AT3G61970 N 0.733
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.733
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.733
Bo4g099000 Brassica oleracea Bo4g099000 N 0.733
TRIUR3_01515 Triticum urartu TRIUR3_01515 N 0.731
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.729
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.727
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.727
Cla014858 Citrullus lanatus Cla014858 N 0.727
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.724
Bra004501 Brassica rapa Bra004501 N 0.723
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.723
MLOC_38822 Hordeum vulgare MLOC_38822 I 0.723
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.723
Bra003482 Brassica rapa Bra003482 N 0.723
MDP0000288808 Malus domestica MDP0000288808 N 0.723
MDP0000138163 Malus domestica MDP0000138163 N 0.723
MDP0000229742 Malus domestica MDP0000229742 N 0.723
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.723
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.720
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.720
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.717
Ca_25633 Cicer arietinum Ca_25633 I 0.717
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.717
PK04952.1 Cannabis sativa PK04952.1 I 0.717
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.717
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.713
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.713
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.713
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.713
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.713
Bo6g079210 Brassica oleracea Bo6g079210 N 0.713
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.713
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.713
OB12G13420 Oryza brachyantha OB12G13420 N 0.713
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.713
OB01G36520 Oryza brachyantha OB01G36520 I 0.711
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.711
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.710
F775_31255 Aegilops tauschii F775_31255 N 0.710
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.707
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.707
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.707
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.704
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.704
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.703
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.703
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.703
Traes_1BL_B8B4C1FB6 Triticum aestivum Traes_1BL_B8B4C1FB6 I 0.703
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I 0.703
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I 0.703
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.703
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.703
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.703
Si039972m.g Setaria italica Si039972m.g N 0.703
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.703
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.703
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.703
F775_02500 Aegilops tauschii F775_02500 N 0.703
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.703
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.703
TRIUR3_29732 Triticum urartu TRIUR3_29732 N 0.703
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.703
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.703
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.703
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.703
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.703
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.703
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.703
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.703
30032.m000462 Ricinus communis 30032.m000462 N 0.703
Cla017937 Citrullus lanatus Cla017937 I 0.703
MDP0000128295 Malus domestica MDP0000128295 N 0.702
Pavir.Fa01903 Panicum virgatum Pavir.Fa01903 N 0.701
OLONG_022770 Oryza longistaminata OLONG_022770 N 0.700
Traes_2DL_2D1980C7B Triticum aestivum Traes_2DL_2D1980C7B N 0.700
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.700
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.700
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.700
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.700