ENSONIG00000003797 (Oreochromis niloticus)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox) 		IPR003350
IPR001356 		ENSONIG00000003797 T167189_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CUX1
M02946_2.00 		Homo sapiens
ATCRATHNNNDATCRAT
ATYGATHNNNDATYGAT		 SELEX
Jolma et al.(2013)
CUX1_1 		0.839 0.839
CUX1
M02947_2.00 		Homo sapiens
ATCRATHNNNNDATCRAT
ATYGATHNNNNDATYGAT		 SELEX
Jolma et al.(2013)
CUX1_2 		0.839 0.839
CUX1
M02948_2.00 		Homo sapiens
TDATCRATNN
NNATYGATHA		 SELEX
Jolma et al.(2013)
CUX1_3 		0.839 0.839
CUX1
M04679_2.00 		Homo sapiens
NDATCRATNN
NNATYGATHN		 SELEX
Yin et al.(2017)
CUX1_eDBD_HT-SELEX 		0.839 0.839
CUX1
M09023_2.00 		Homo sapiens
RBRVNDATYGRTBN
NVAYCRATHNBYVY		 Misc
Kulakovskiy et al.(2013)
CUX1_HUMAN.H11MO.0.C 		0.839 0.839
Cux1
M09024_2.00 		Mus musculus
RBRVNDATYGRTBN
NVAYCRATHNBYVY		 Misc
Kulakovskiy et al.(2013)
CUX1_MOUSE.H11MO.0.C 		0.839 0.839
CUX1
M10422_2.00 		Homo sapiens
CCAATAATCRAT
ATYGATTATTGG		 Transfac
Matys et al.(2006)
V$CDP_01 		0.839 0.839
CUX1
M10423_2.00 		Homo sapiens
DWDATCGATYADHDH
DHDHTRATCGATHWH		 Transfac
Matys et al.(2006)
V$CDP_02 		0.839 0.839
CUX1
M10424_2.00 		Homo sapiens
SCVATCRATN
NATYGATBGS		 Transfac
Matys et al.(2006)
V$CDPCR1_01 		0.839 0.839
CUX1
M10425_2.00 		Homo sapiens
CVATABNTATYKGTG
CACMRATANVTATBG		 Transfac
Matys et al.(2006)
V$CDPCR3_01 		0.839 0.839
CUX1
M10426_2.00 		Homo sapiens
SVSATCRATB
VATYGATSBS		 Transfac
Matys et al.(2006)
V$CDPCR3HD_01 		0.839 0.839
CUX1
M10427_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDP_Q6_01 		0.839 0.839
CUX1
M10416_2.00 		Canis familiaris
DHDATYGATYADYDW
WHRHTRATCRATHDH		 Transfac
Matys et al.(2006)
V$CLOX_01 		0.839 0.839
CUX1
M04680_2.00 		Homo sapiens
NBATTGATHR
YDATCAATVN		 SELEX
Yin et al.(2017)
CUX1_eDBD_Methyl-HT-SELEX 		0.839 0.839
CUX2
M02940_2.00 		Homo sapiens
ATCRATAHNNDWATCGAT
ATCGATWHNNDTATYGAT		 SELEX
Jolma et al.(2013)
CUX2_1 		0.770 0.770
CUX2
M02941_2.00 		Homo sapiens
DDATYGATYA
TRATCRATHH		 SELEX
Jolma et al.(2013)
CUX2_2 		0.770 0.770
CUX2
M04665_2.00 		Homo sapiens
NTRATCGATYRN
NYRATCGATYAN		 SELEX
Yin et al.(2017)
CUX2_eDBD_HT-SELEX 		0.770 0.770
CUX2
M04666_2.00 		Homo sapiens
BYRATCGATYRB
VYRATCGATYRV		 SELEX
Yin et al.(2017)
CUX2_eDBD_Methyl-HT-SELEX 		0.770 0.770
Cux2
M09025_2.00 		Mus musculus
NBBATTGATYD
HRATCAATVVN		 Misc
Kulakovskiy et al.(2013)
CUX2_MOUSE.H11MO.0.C 		0.766 0.766
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000004774 CUT 602 679
ENSONIP00000004774 CUT 916 976
ENSONIP00000004774 CUT 1054 1132
ENSONIP00000004774 Homeodomain 1177 1233

Links

Other CUT,Homeodomain family TFs
Other Oreochromis niloticus TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSGACG00000009915 Gasterosteus aculeatus ENSGACG00000009915 I 0.946
ENSTNIG00000007722 Tetraodon nigroviridis ENSTNIG00000007722 I 0.928
ENSXMAG00000018520 Xiphophorus maculatus ENSXMAG00000018520 I 0.914
CUX1 Takifugu rubripes ENSTRUG00000008546 I 0.908
ENSGMOG00000008990 Gadus morhua ENSGMOG00000008990 I 0.904
ENSLOCG00000001531 Lepisosteus oculatus ENSLOCG00000001531 I 0.866
ENSLACG00000017710 Latimeria chalumnae ENSLACG00000017710 I 0.847
CUX1 Callithrix jacchus ENSCJAG00000016076 I 0.843
CUX1 Taeniopygia guttata ENSTGUG00000004386 I 0.839
Aan_R003487 Calypte anna Aan_R003487 I 0.839
Afo_R009437 Aptenodytes forsteri Afo_R009437 I 0.839
ENSGALG00000001807 Gallus gallus ENSGALG00000001807 I 0.839
Alligator_sinensis_CCG004936.1 Alligator sinensis Alligator_sinensis_CCG004936.1 I 0.839
ENSFALG00000009409 Ficedula albicollis ENSFALG00000009409 I 0.839
Ogr05066 Ophisaurus gracilis Ogr05066 I 0.839
Gfo_R011360 Geospiza fortis Gfo_R011360 I 0.839
ENSAPLG00000002588 Anas platyrhynchos ENSAPLG00000002588 I 0.839
CUX1 Erinaceus europaeus ENSEEUG00000005128 I 0.835
ENSAMXG00000008817 Astyanax mexicanus ENSAMXG00000008817 I 0.835
ENSPSIG00000008210 Pelodiscus sinensis ENSPSIG00000008210 I 0.835
Cmyd_10006308 Chelonia mydas Cmyd_10006308 I 0.835
ENSSTOG00000010390 Ictidomys tridecemlineatus ENSSTOG00000010390 I 0.824
ENSAMEG00000015392 Ailuropoda melanoleuca ENSAMEG00000015392 I 0.820
CUX1 Loxodonta africana ENSLAFG00000002555 I 0.820
ENSPANG00000016879 Papio anubis ENSPANG00000016879 I 0.820
ENSOARG00000014629 Ovis aries ENSOARG00000014629 I 0.820
CUX1 Tursiops truncatus ENSTTRG00000014625 I 0.820
CUX1 Felis catus ENSFCAG00000008074 I 0.820
CUX1 Ochotona princeps ENSOPRG00000000165 I 0.816
Myotis_brandtii_CUX1_10015212 Myotis brandtii Myotis_brandtii_CUX1_10015212 I 0.816
CUX1 Microcebus murinus ENSMICG00000010274 I 0.811
ENSXMAG00000004131 Xiphophorus maculatus ENSXMAG00000004131 I 0.793
cux2b Takifugu rubripes ENSTRUG00000015853 I 0.787
ENSSHAG00000009458 Sarcophilus harrisii ENSSHAG00000009458 I 0.782
ENSLACG00000014413 Latimeria chalumnae ENSLACG00000014413 I 0.782
cux2b Oryzias latipes ENSORLG00000015973 I 0.782
CUX2 Ornithorhynchus anatinus ENSOANG00000004793 I 0.782
ENSONIG00000015972 Oreochromis niloticus ENSONIG00000015972 I 0.782
Ogr05872 Ophisaurus gracilis Ogr05872 I 0.778
ENSFALG00000009019 Ficedula albicollis ENSFALG00000009019 I 0.778
CUX2 Meleagris gallopavo ENSMGAG00000005225 I 0.778
CUX2 Anolis carolinensis ENSACAG00000002281 I 0.778
CUX2 Gallus gallus ENSGALG00000004598 I 0.778
CUX1 Anolis carolinensis ENSACAG00000015088 I 0.776
ENSGMOG00000017485 Gadus morhua ENSGMOG00000017485 I 0.774
cux2 Xenopus tropicalis XB-GENE-487236 I 0.774
CUX2 Cavia porcellus ENSCPOG00000020483 I 0.774
Myotis_brandtii_CUX2_10011523 Myotis brandtii Myotis_brandtii_CUX2_10011523 I 0.770
ENSSTOG00000002242 Ictidomys tridecemlineatus ENSSTOG00000002242 I 0.770
ENSAMEG00000013799 Ailuropoda melanoleuca ENSAMEG00000013799 I 0.770
cux2b Tetraodon nigroviridis ENSTNIG00000011453 I 0.770
cux2b Danio rerio ENSDARG00000086345 I 0.770
CUX2 Loxodonta africana ENSLAFG00000001145 I 0.770
CUX2 Myotis lucifugus ENSMLUG00000003239 I 0.770
ENSSHAG00000007801 Sarcophilus harrisii ENSSHAG00000007801 I 0.769
CUX1 Monodelphis domestica ENSMODG00000013581 I 0.769
Pvit_01819 Pogona vitticeps Pvit_01819 I 0.766
Cux2 Mus musculus ENSMUSG00000042589 D 0.766
CUX2 Dasypus novemcinctus ENSDNOG00000039959 I 0.766
cux1a Danio rerio ENSDARG00000078459 I 0.763
Aan_R010335 Calypte anna Aan_R010335 I 0.762
Cux1 Rattus norvegicus ENSRNOG00000001424 I 0.760
ENSP00000353401 Macaca fascicularis ENSP00000353401 I 0.760
ENSP00000353401-D1 Bos grunniens ENSP00000353401-D1 I 0.760
ENSNLEG00000008310 Nomascus leucogenys ENSNLEG00000008310 I 0.760
Cux1 Mus musculus ENSMUSG00000029705 D 0.760
CUX1 Bos taurus ENSBTAG00000010659 I 0.760
CUX1 Homo sapiens ENSG00000257923 D 0.760
ENSCSAG00000018062 Chlorocebus sabaeus ENSCSAG00000018062 I 0.760
CUX1 Macaca mulatta ENSMMUG00000021461 I 0.760
CUX1 Pan troglodytes ENSPTRG00000019531 I 0.760
CUX1 Myotis lucifugus ENSMLUG00000007264 I 0.760
CUX1 Canis familiaris ENSCAFG00000013749 D 0.760
ENSOGAG00000009038 Otolemur garnettii ENSOGAG00000009038 I 0.759
CUX1 Meleagris gallopavo ENSMGAG00000003398 I 0.757
XP_002942311 Xenopus tropicalis XP_002942311 I 0.754
Tal_R013483 Tyto alba Tal_R013483 I 0.754
ENSAPLG00000004382 Anas platyrhynchos ENSAPLG00000004382 I 0.747
ENSLOCG00000007417 Lepisosteus oculatus ENSLOCG00000007417 I 0.716
ENSPFOG00000005210 Poecilia formosa ENSPFOG00000005210 I 0.716
Alligator_sinensis_CCG016555.1 Alligator sinensis Alligator_sinensis_CCG016555.1 I 0.714
Cmyd_10015658 Chelonia mydas Cmyd_10015658 I 0.710
CUX2 Monodelphis domestica ENSMODG00000012254 I 0.708
Gfo_R003142 Geospiza fortis Gfo_R003142 I 0.706
cux2b Gasterosteus aculeatus ENSGACG00000013522 I 0.705
CUX2 Canis familiaris ENSCAFG00000008575 I 0.701
CUX2 Felis catus ENSFCAG00000003176 I 0.701
Pvit_05599 Pogona vitticeps Pvit_05599 I 0.701
CUX2 Pan troglodytes ENSPTRG00000005455 I 0.701
CUX2 Sus scrofa ENSSSCG00000009831 I 0.700
CUX2 Ochotona princeps ENSOPRG00000006461 I 0.700
ENSAMXG00000006105 Astyanax mexicanus ENSAMXG00000006105 I 0.700
CUX2 Bos taurus ENSBTAG00000008571 I 0.700
CUX2 Callithrix jacchus ENSCJAG00000011694 I 0.700
CUX2 Homo sapiens ENSG00000111249 D 0.700
CUX2 Pteropus vampyrus ENSPVAG00000013176 I 0.700
ENSP00000261726-D1 Bos grunniens ENSP00000261726-D1 I 0.700
ENSP00000261726 Macaca fascicularis ENSP00000261726 I 0.700
ENSNLEG00000000470 Nomascus leucogenys ENSNLEG00000000470 I 0.700
CUX2 Otolemur garnettii ENSOGAG00000029919 I 0.700