ENSONIG00000015972 (Oreochromis niloticus)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
ENSONIG00000015972 T167196_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CUX2
M02940_2.00
Homo sapiens
ATCRATAHNNDWATCGAT

ATCGATWHNNDTATYGAT
SELEX
Jolma et al.(2013)
CUX2_1
0.920 0.920
CUX2
M02941_2.00
Homo sapiens
DDATYGATYA

TRATCRATHH
SELEX
Jolma et al.(2013)
CUX2_2
0.921 0.921
CUX2
M04665_2.00
Homo sapiens
NTRATCGATYRN

NYRATCGATYAN
SELEX
Yin et al.(2017)
CUX2_eDBD_HT-SELEX
0.921 0.921
CUX2
M04666_2.00
Homo sapiens
BYRATCGATYRB

VYRATCGATYRV
SELEX
Yin et al.(2017)
CUX2_eDBD_Methyl-HT-SELEX
0.921 0.921
Cux2
M09025_2.00
Mus musculus
NBBATTGATYD

HRATCAATVVN
Misc
Kulakovskiy et al.(2013)
CUX2_MOUSE.H11MO.0.C
0.913 0.913
CUX1
M02946_2.00
Homo sapiens
ATCRATHNNNDATCRAT

ATYGATHNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_1
0.865 0.865
CUX1
M02947_2.00
Homo sapiens
ATCRATHNNNNDATCRAT

ATYGATHNNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_2
0.865 0.865
CUX1
M02948_2.00
Homo sapiens
TDATCRATNN

NNATYGATHA
SELEX
Jolma et al.(2013)
CUX1_3
0.865 0.865
CUX1
M04679_2.00
Homo sapiens
NDATCRATNN

NNATYGATHN
SELEX
Yin et al.(2017)
CUX1_eDBD_HT-SELEX
0.865 0.865
CUX1
M09023_2.00
Homo sapiens
RBRVNDATYGRTBN

NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_HUMAN.H11MO.0.C
0.862 0.862
Cux1
M09024_2.00
Mus musculus
RBRVNDATYGRTBN

NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_MOUSE.H11MO.0.C
0.862 0.862
CUX1
M10422_2.00
Homo sapiens
CCAATAATCRAT

ATYGATTATTGG
Transfac
Matys et al.(2006)
V$CDP_01
0.862 0.862
CUX1
M10423_2.00
Homo sapiens
DWDATCGATYADHDH

DHDHTRATCGATHWH
Transfac
Matys et al.(2006)
V$CDP_02
0.865 0.865
CUX1
M10424_2.00
Homo sapiens
SCVATCRATN

NATYGATBGS
Transfac
Matys et al.(2006)
V$CDPCR1_01
0.865 0.865
CUX1
M10425_2.00
Homo sapiens
CVATABNTATYKGTG

CACMRATANVTATBG
Transfac
Matys et al.(2006)
V$CDPCR3_01
0.865 0.865
CUX1
M10426_2.00
Homo sapiens
SVSATCRATB

VATYGATSBS
Transfac
Matys et al.(2006)
V$CDPCR3HD_01
0.865 0.865
CUX1
M10427_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDP_Q6_01
0.865 0.865
CUX1
M10416_2.00
Canis familiaris
DHDATYGATYADYDW

WHRHTRATCRATHDH
Transfac
Matys et al.(2006)
V$CLOX_01
0.862 0.862
CUX1
M04680_2.00
Homo sapiens
NBATTGATHR

YDATCAATVN
SELEX
Yin et al.(2017)
CUX1_eDBD_Methyl-HT-SELEX
0.862 0.862
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000020114 CUT 560 637
ENSONIP00000020114 CUT 927 1004
ENSONIP00000020114 CUT 1092 1170
ENSONIP00000020114 Homeodomain 1219 1275
ENSONIP00000020115 CUT 491 569
ENSONIP00000020115 CUT 861 938
ENSONIP00000020115 CUT 1047 1125
ENSONIP00000020115 Homeodomain 1174 1230

Links

Other CUT,Homeodomain family TFs
Other Oreochromis niloticus TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cux2b Oryzias latipes ENSORLG00000015973 I 0.990
cux2b Gasterosteus aculeatus ENSGACG00000013522 I 0.972
ENSGMOG00000017485 Gadus morhua ENSGMOG00000017485 I 0.972
ENSPFOG00000005210 Poecilia formosa ENSPFOG00000005210 I 0.972
ENSXMAG00000004131 Xiphophorus maculatus ENSXMAG00000004131 I 0.969
cux2b Takifugu rubripes ENSTRUG00000015853 I 0.969
ENSAMXG00000006105 Astyanax mexicanus ENSAMXG00000006105 I 0.962
ENSLOCG00000007417 Lepisosteus oculatus ENSLOCG00000007417 I 0.961
cux2b Tetraodon nigroviridis ENSTNIG00000011453 I 0.958
cux2b Danio rerio ENSDARG00000086345 I 0.955
Cmyd_10015658 Chelonia mydas Cmyd_10015658 I 0.941
Alligator_sinensis_CCG016555.1 Alligator sinensis Alligator_sinensis_CCG016555.1 I 0.937
CUX2 Monodelphis domestica ENSMODG00000012254 I 0.931
ENSNLEG00000000470 Nomascus leucogenys ENSNLEG00000000470 I 0.930
CUX2 Meleagris gallopavo ENSMGAG00000005225 I 0.930
CUX2 Gallus gallus ENSGALG00000004598 I 0.930
CUX2 Homo sapiens ENSG00000111249 D 0.930
CUX2 Otolemur garnettii ENSOGAG00000029919 I 0.930
CUX2 Bos taurus ENSBTAG00000008571 I 0.930
ENSP00000261726-D1 Bos grunniens ENSP00000261726-D1 I 0.930
ENSP00000261726 Macaca fascicularis ENSP00000261726 I 0.930
CUX2 Sus scrofa ENSSSCG00000009831 I 0.930
CUX2 Callithrix jacchus ENSCJAG00000011694 I 0.930
ENSSHAG00000009458 Sarcophilus harrisii ENSSHAG00000009458 I 0.928
CUX2 Ornithorhynchus anatinus ENSOANG00000004793 I 0.928
ENSOARG00000017879 Ovis aries ENSOARG00000017879 I 0.927
CUX2 Ochotona princeps ENSOPRG00000006461 I 0.927
CUX2 Pteropus vampyrus ENSPVAG00000013176 I 0.927
CUX2 Tursiops truncatus ENSTTRG00000000945 I 0.927
Gfo_R003142 Geospiza fortis Gfo_R003142 I 0.926
CUX2 Canis familiaris ENSCAFG00000008575 I 0.924
CUX2 Loxodonta africana ENSLAFG00000001145 I 0.924
CUX2 Anolis carolinensis ENSACAG00000002281 I 0.924
ENSLACG00000014413 Latimeria chalumnae ENSLACG00000014413 I 0.924
Pvit_05599 Pogona vitticeps Pvit_05599 I 0.924
ENSAMEG00000013799 Ailuropoda melanoleuca ENSAMEG00000013799 I 0.924
CUX2 Felis catus ENSFCAG00000003176 I 0.924
CUX2 Myotis lucifugus ENSMLUG00000003239 I 0.921
CUX2 Cavia porcellus ENSCPOG00000020483 I 0.921
Myotis_brandtii_CUX2_10011523 Myotis brandtii Myotis_brandtii_CUX2_10011523 I 0.921
CUX2 Oryctolagus cuniculus ENSOCUG00000021923 I 0.920
ENSMPUG00000002207 Mustela putorius furo ENSMPUG00000002207 I 0.917
ENSSTOG00000002242 Ictidomys tridecemlineatus ENSSTOG00000002242 I 0.914
ENSFALG00000009019 Ficedula albicollis ENSFALG00000009019 I 0.914
Cux2 Mus musculus ENSMUSG00000042589 D 0.914
Ogr05872 Ophisaurus gracilis Ogr05872 I 0.910
Cux2 Rattus norvegicus ENSRNOG00000001259 I 0.910
CUX2 Dasypus novemcinctus ENSDNOG00000039959 I 0.910
CUX2 Taeniopygia guttata ENSTGUG00000006470 I 0.904
Aan_R010335 Calypte anna Aan_R010335 I 0.903
cux2 Xenopus tropicalis XB-GENE-487236 I 0.903
ENSAPLG00000004382 Anas platyrhynchos ENSAPLG00000004382 I 0.890
ENSOGAG00000009038 Otolemur garnettii ENSOGAG00000009038 I 0.881
CUX1 Anolis carolinensis ENSACAG00000015088 I 0.874
ENSSHAG00000007801 Sarcophilus harrisii ENSSHAG00000007801 I 0.874
Pvit_01819 Pogona vitticeps Pvit_01819 I 0.874
CUX1 Monodelphis domestica ENSMODG00000013581 I 0.874
CUX1 Meleagris gallopavo ENSMGAG00000003398 I 0.871
XP_002942311 Xenopus tropicalis XP_002942311 I 0.869
ENSLACG00000017710 Latimeria chalumnae ENSLACG00000017710 I 0.869
ENSNLEG00000008310 Nomascus leucogenys ENSNLEG00000008310 I 0.868
Cux1 Rattus norvegicus ENSRNOG00000001424 I 0.868
Cux1 Mus musculus ENSMUSG00000029705 D 0.868
CUX1 Homo sapiens ENSG00000257923 D 0.868
ENSP00000353401-D1 Bos grunniens ENSP00000353401-D1 I 0.868
ENSCSAG00000018062 Chlorocebus sabaeus ENSCSAG00000018062 I 0.868
CUX1 Microcebus murinus ENSMICG00000010274 I 0.868
CUX1 Canis familiaris ENSCAFG00000013749 D 0.868
CUX1 Macaca mulatta ENSMMUG00000021461 I 0.868
ENSP00000353401 Macaca fascicularis ENSP00000353401 I 0.868
ENSPANG00000016879 Papio anubis ENSPANG00000016879 I 0.868
CUX1 Bos taurus ENSBTAG00000010659 I 0.868
CUX1 Myotis lucifugus ENSMLUG00000007264 I 0.868
CUX1 Pan troglodytes ENSPTRG00000019531 I 0.868
Tal_R013483 Tyto alba Tal_R013483 I 0.866
Alligator_sinensis_CCG004936.1 Alligator sinensis Alligator_sinensis_CCG004936.1 I 0.865
Afo_R009437 Aptenodytes forsteri Afo_R009437 I 0.865
Aan_R003487 Calypte anna Aan_R003487 I 0.865
ENSGALG00000001807 Gallus gallus ENSGALG00000001807 I 0.865
ENSLOCG00000001531 Lepisosteus oculatus ENSLOCG00000001531 I 0.865
CUX1 Taeniopygia guttata ENSTGUG00000004386 I 0.865
ENSAPLG00000002588 Anas platyrhynchos ENSAPLG00000002588 I 0.865
ENSFALG00000009409 Ficedula albicollis ENSFALG00000009409 I 0.865
CUX1 Callithrix jacchus ENSCJAG00000016076 I 0.865
Gfo_R011360 Geospiza fortis Gfo_R011360 I 0.865
Cmyd_10006308 Chelonia mydas Cmyd_10006308 I 0.862
CUX1 Erinaceus europaeus ENSEEUG00000005128 I 0.862
ENSPSIG00000008210 Pelodiscus sinensis ENSPSIG00000008210 I 0.862
Ogr05066 Ophisaurus gracilis Ogr05066 I 0.862
ENSSTOG00000010390 Ictidomys tridecemlineatus ENSSTOG00000010390 I 0.855
cux1a Danio rerio ENSDARG00000078459 I 0.854
ENSOARG00000014629 Ovis aries ENSOARG00000014629 I 0.851
CUX1 Felis catus ENSFCAG00000008074 I 0.851
CUX1 Loxodonta africana ENSLAFG00000002555 I 0.851
ENSAMEG00000015392 Ailuropoda melanoleuca ENSAMEG00000015392 I 0.851
Myotis_brandtii_CUX1_10015212 Myotis brandtii Myotis_brandtii_CUX1_10015212 I 0.848
CUX1 Tursiops truncatus ENSTTRG00000014625 I 0.848
CUX1 Ochotona princeps ENSOPRG00000000165 I 0.844
ENSAMXG00000008817 Astyanax mexicanus ENSAMXG00000008817 I 0.830
CUX2 Pan troglodytes ENSPTRG00000005455 I 0.790
ENSONIG00000003797 Oreochromis niloticus ENSONIG00000003797 I 0.782
ENSTNIG00000007722 Tetraodon nigroviridis ENSTNIG00000007722 I 0.777
ENSMEUG00000004239 Macropus eugenii ENSMEUG00000004239 I 0.767
ENSXMAG00000018520 Xiphophorus maculatus ENSXMAG00000018520 I 0.767
CUX1 Takifugu rubripes ENSTRUG00000008546 I 0.748
ENSGACG00000009915 Gasterosteus aculeatus ENSGACG00000009915 I 0.702
ENSGMOG00000008990 Gadus morhua ENSGMOG00000008990 I 0.702