ENSPFOG00000005210 (Poecilia formosa)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox) 		IPR003350
IPR001356 		ENSPFOG00000005210 T167221_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CUX2
M02940_2.00 		Homo sapiens
ATCRATAHNNDWATCGAT
ATCGATWHNNDTATYGAT		 SELEX
Jolma et al.(2013)
CUX2_1 		0.927 0.927
CUX2
M02941_2.00 		Homo sapiens
DDATYGATYA
TRATCRATHH		 SELEX
Jolma et al.(2013)
CUX2_2 		0.927 0.927
CUX2
M04665_2.00 		Homo sapiens
NTRATCGATYRN
NYRATCGATYAN		 SELEX
Yin et al.(2017)
CUX2_eDBD_HT-SELEX 		0.927 0.927
CUX2
M04666_2.00 		Homo sapiens
BYRATCGATYRB
VYRATCGATYRV		 SELEX
Yin et al.(2017)
CUX2_eDBD_Methyl-HT-SELEX 		0.927 0.927
Cux2
M09025_2.00 		Mus musculus
NBBATTGATYD
HRATCAATVVN		 Misc
Kulakovskiy et al.(2013)
CUX2_MOUSE.H11MO.0.C 		0.920 0.920
CUX1
M02946_2.00 		Homo sapiens
ATCRATHNNNDATCRAT
ATYGATHNNNDATYGAT		 SELEX
Jolma et al.(2013)
CUX1_1 		0.875 0.875
CUX1
M02947_2.00 		Homo sapiens
ATCRATHNNNNDATCRAT
ATYGATHNNNNDATYGAT		 SELEX
Jolma et al.(2013)
CUX1_2 		0.875 0.875
CUX1
M02948_2.00 		Homo sapiens
TDATCRATNN
NNATYGATHA		 SELEX
Jolma et al.(2013)
CUX1_3 		0.875 0.875
CUX1
M04679_2.00 		Homo sapiens
NDATCRATNN
NNATYGATHN		 SELEX
Yin et al.(2017)
CUX1_eDBD_HT-SELEX 		0.875 0.875
CUX1
M09023_2.00 		Homo sapiens
RBRVNDATYGRTBN
NVAYCRATHNBYVY		 Misc
Kulakovskiy et al.(2013)
CUX1_HUMAN.H11MO.0.C 		0.875 0.875
Cux1
M09024_2.00 		Mus musculus
RBRVNDATYGRTBN
NVAYCRATHNBYVY		 Misc
Kulakovskiy et al.(2013)
CUX1_MOUSE.H11MO.0.C 		0.875 0.875
CUX1
M10422_2.00 		Homo sapiens
CCAATAATCRAT
ATYGATTATTGG		 Transfac
Matys et al.(2006)
V$CDP_01 		0.875 0.875
CUX1
M10423_2.00 		Homo sapiens
DWDATCGATYADHDH
DHDHTRATCGATHWH		 Transfac
Matys et al.(2006)
V$CDP_02 		0.875 0.875
CUX1
M10424_2.00 		Homo sapiens
SCVATCRATN
NATYGATBGS		 Transfac
Matys et al.(2006)
V$CDPCR1_01 		0.875 0.875
CUX1
M10425_2.00 		Homo sapiens
CVATABNTATYKGTG
CACMRATANVTATBG		 Transfac
Matys et al.(2006)
V$CDPCR3_01 		0.875 0.875
CUX1
M10426_2.00 		Homo sapiens
SVSATCRATB
VATYGATSBS		 Transfac
Matys et al.(2006)
V$CDPCR3HD_01 		0.875 0.875
CUX1
M10427_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDP_Q6_01 		0.875 0.875
CUX1
M10416_2.00 		Canis familiaris
DHDATYGATYADYDW
WHRHTRATCRATHDH		 Transfac
Matys et al.(2006)
V$CLOX_01 		0.875 0.875
CUX1
M04680_2.00 		Homo sapiens
NBATTGATHR
YDATCAATVN		 SELEX
Yin et al.(2017)
CUX1_eDBD_Methyl-HT-SELEX 		0.875 0.875
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPFOP00000005281 CUT 385 462
ENSPFOP00000005281 CUT 747 823
ENSPFOP00000005281 CUT 934 1013
ENSPFOP00000005281 Homeodomain 1061 1117
ENSPFOP00000021330 CUT 387 464
ENSPFOP00000021330 CUT 758 834
ENSPFOP00000021330 CUT 923 1028
ENSPFOP00000026066 CUT 18 97
ENSPFOP00000026066 Homeodomain 145 198
ENSPFOP00000027562 CUT 387 464
ENSPFOP00000027562 CUT 758 834
ENSPFOP00000027562 CUT 923 1002

Links

Other CUT,Homeodomain family TFs
Other Poecilia formosa TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSXMAG00000004131 Xiphophorus maculatus ENSXMAG00000004131 I 0.997
cux2b Oryzias latipes ENSORLG00000015973 I 0.976
ENSONIG00000015972 Oreochromis niloticus ENSONIG00000015972 I 0.972
cux2b Takifugu rubripes ENSTRUG00000015853 I 0.972
ENSGMOG00000017485 Gadus morhua ENSGMOG00000017485 I 0.965
cux2b Gasterosteus aculeatus ENSGACG00000013522 I 0.965
cux2b Tetraodon nigroviridis ENSTNIG00000011453 I 0.962
cux2b Danio rerio ENSDARG00000086345 I 0.952
ENSAMXG00000006105 Astyanax mexicanus ENSAMXG00000006105 I 0.948
ENSLOCG00000007417 Lepisosteus oculatus ENSLOCG00000007417 I 0.945
CUX2 Monodelphis domestica ENSMODG00000012254 I 0.938
Cmyd_10015658 Chelonia mydas Cmyd_10015658 I 0.937
Alligator_sinensis_CCG016555.1 Alligator sinensis Alligator_sinensis_CCG016555.1 I 0.934
CUX2 Tursiops truncatus ENSTTRG00000000945 I 0.931
ENSLACG00000014413 Latimeria chalumnae ENSLACG00000014413 I 0.931
CUX2 Echinops telfairi ENSETEG00000020014 N 0.931
CUX2 Loxodonta africana ENSLAFG00000001145 I 0.931
ENSSHAG00000009458 Sarcophilus harrisii ENSSHAG00000009458 I 0.931
ENSOARG00000017879 Ovis aries ENSOARG00000017879 I 0.930
CUX2 Pteropus vampyrus ENSPVAG00000013176 I 0.930
Gfo_R003142 Geospiza fortis Gfo_R003142 I 0.929
ENSP00000261726 Macaca fascicularis ENSP00000261726 I 0.927
Myotis_brandtii_CUX2_10011523 Myotis brandtii Myotis_brandtii_CUX2_10011523 I 0.927
CUX2 Gallus gallus ENSGALG00000004598 I 0.927
ENSP00000261726-D1 Bos grunniens ENSP00000261726-D1 I 0.927
CUX2 Meleagris gallopavo ENSMGAG00000005225 I 0.927
CUX2 Otolemur garnettii ENSOGAG00000029919 I 0.927
CUX2 Myotis lucifugus ENSMLUG00000003239 I 0.927
CUX2 Sus scrofa ENSSSCG00000009831 I 0.927
CUX2 Ornithorhynchus anatinus ENSOANG00000004793 I 0.927
ENSNLEG00000000470 Nomascus leucogenys ENSNLEG00000000470 I 0.927
CUX2 Callithrix jacchus ENSCJAG00000011694 I 0.927
CUX2 Cavia porcellus ENSCPOG00000020483 I 0.927
CUX2 Bos taurus ENSBTAG00000008571 I 0.927
CUX2 Felis catus ENSFCAG00000003176 I 0.927
CUX2 Homo sapiens ENSG00000111249 D 0.927
CUX2 Canis familiaris ENSCAFG00000008575 I 0.927
Pvit_05599 Pogona vitticeps Pvit_05599 I 0.924
CUX2 Ochotona princeps ENSOPRG00000006461 I 0.924
CUX2 Oryctolagus cuniculus ENSOCUG00000021923 I 0.923
ENSMPUG00000002207 Mustela putorius furo ENSMPUG00000002207 I 0.920
Cux2 Mus musculus ENSMUSG00000042589 D 0.920
CUX2 Anolis carolinensis ENSACAG00000002281 I 0.920
ENSAMEG00000013799 Ailuropoda melanoleuca ENSAMEG00000013799 I 0.920
ENSSTOG00000002242 Ictidomys tridecemlineatus ENSSTOG00000002242 I 0.920
ENSFALG00000009019 Ficedula albicollis ENSFALG00000009019 I 0.920
CUX2 Dasypus novemcinctus ENSDNOG00000039959 I 0.917
Cux2 Rattus norvegicus ENSRNOG00000001259 I 0.913
Ogr05872 Ophisaurus gracilis Ogr05872 I 0.910
Aan_R010335 Calypte anna Aan_R010335 I 0.910
cux2 Xenopus tropicalis XB-GENE-487236 I 0.910
CUX2 Taeniopygia guttata ENSTGUG00000006470 I 0.904
CUX1 Sus scrofa ENSSSCG00000007681 N 0.900
ENSAPLG00000004382 Anas platyrhynchos ENSAPLG00000004382 I 0.896
CUX1 Dasypus novemcinctus ENSDNOG00000025440 N 0.892
ENSOGAG00000009038 Otolemur garnettii ENSOGAG00000009038 I 0.892
CUX1 Cavia porcellus ENSCPOG00000008564 N 0.888
CUX1 Anolis carolinensis ENSACAG00000015088 I 0.885
Pvit_01819 Pogona vitticeps Pvit_01819 I 0.885
CUX1 Microcebus murinus ENSMICG00000010274 I 0.881
CUX2 Microcebus murinus ENSMICG00000012274 N 0.880
ENSLACG00000017710 Latimeria chalumnae ENSLACG00000017710 I 0.879
CUX1 Oryctolagus cuniculus ENSOCUG00000015625 N 0.879
CUX1 Bos taurus ENSBTAG00000010659 I 0.878
ENSP00000353401-D1 Bos grunniens ENSP00000353401-D1 I 0.878
Cux1 Mus musculus ENSMUSG00000029705 D 0.878
Cux1 Rattus norvegicus ENSRNOG00000001424 I 0.878
CUX1 Myotis lucifugus ENSMLUG00000007264 I 0.878
CUX1 Canis familiaris ENSCAFG00000013749 D 0.878
Alligator_sinensis_CCG004936.1 Alligator sinensis Alligator_sinensis_CCG004936.1 I 0.875
ENSAPLG00000002588 Anas platyrhynchos ENSAPLG00000002588 I 0.875
Afo_R009437 Aptenodytes forsteri Afo_R009437 I 0.875
ENSSHAG00000007801 Sarcophilus harrisii ENSSHAG00000007801 I 0.875
Aan_R003487 Calypte anna Aan_R003487 I 0.875
CUX1 Taeniopygia guttata ENSTGUG00000004386 I 0.875
ENSP00000353401 Macaca fascicularis ENSP00000353401 I 0.875
Gfo_R011360 Geospiza fortis Gfo_R011360 I 0.875
CUX1 Macaca mulatta ENSMMUG00000021461 I 0.875
ENSLOCG00000001531 Lepisosteus oculatus ENSLOCG00000001531 I 0.875
ENSFALG00000009409 Ficedula albicollis ENSFALG00000009409 I 0.875
ENSGALG00000001807 Gallus gallus ENSGALG00000001807 I 0.875
CUX1 Pan troglodytes ENSPTRG00000019531 I 0.875
ENSCSAG00000018062 Chlorocebus sabaeus ENSCSAG00000018062 I 0.875
ENSPANG00000016879 Papio anubis ENSPANG00000016879 I 0.875
CUX1 Homo sapiens ENSG00000257923 D 0.875
CUX1 Monodelphis domestica ENSMODG00000013581 I 0.875
CUX1 Callithrix jacchus ENSCJAG00000016076 I 0.875
ENSNLEG00000008310 Nomascus leucogenys ENSNLEG00000008310 I 0.875
XP_002942311 Xenopus tropicalis XP_002942311 I 0.872
Ogr05066 Ophisaurus gracilis Ogr05066 I 0.872
Cmyd_10006308 Chelonia mydas Cmyd_10006308 I 0.872
ENSPSIG00000008210 Pelodiscus sinensis ENSPSIG00000008210 I 0.872
CUX1 Erinaceus europaeus ENSEEUG00000005128 I 0.872
ENSSTOG00000010390 Ictidomys tridecemlineatus ENSSTOG00000010390 I 0.865
ENSOANG00000021296 Ornithorhynchus anatinus ENSOANG00000021296 N 0.864
cux1a Danio rerio ENSDARG00000078459 I 0.864
CUX1 Loxodonta africana ENSLAFG00000002555 I 0.862
CUX1 Felis catus ENSFCAG00000008074 I 0.862
Tal_R013483 Tyto alba Tal_R013483 I 0.862
ENSOARG00000014629 Ovis aries ENSOARG00000014629 I 0.862
ENSAMEG00000015392 Ailuropoda melanoleuca ENSAMEG00000015392 I 0.862
CUX1 Tursiops truncatus ENSTTRG00000014625 I 0.858
Myotis_brandtii_CUX1_10015212 Myotis brandtii Myotis_brandtii_CUX1_10015212 I 0.858
CUX1 Ochotona princeps ENSOPRG00000000165 I 0.855
CUX1 Meleagris gallopavo ENSMGAG00000003398 I 0.855
ENSAMXG00000008817 Astyanax mexicanus ENSAMXG00000008817 I 0.834
CUX2 Pan troglodytes ENSPTRG00000005455 I 0.796
ENSTNIG00000007722 Tetraodon nigroviridis ENSTNIG00000007722 I 0.789
ENSMEUG00000004239 Macropus eugenii ENSMEUG00000004239 I 0.779
ENSAMXG00000014925 Astyanax mexicanus ENSAMXG00000014925 N 0.754
ENSONIG00000003797 Oreochromis niloticus ENSONIG00000003797 I 0.716
ENSXMAG00000018520 Xiphophorus maculatus ENSXMAG00000018520 I 0.716
ENSGMOG00000008990 Gadus morhua ENSGMOG00000008990 I 0.713
ENSGACG00000009915 Gasterosteus aculeatus ENSGACG00000009915 I 0.713
CUX1 Takifugu rubripes ENSTRUG00000008546 I 0.709
CUX1 Sorex araneus ENSSARG00000008657 N 0.705
CUX1 Pteropus vampyrus ENSPVAG00000017756 I 0.702