ENSSHAG00000013317 (Sarcophilus harrisii)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSSHAG00000013317 T014770_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.771 0.988
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.771 0.988
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.771 0.988
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.771 0.988
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.771 0.988
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.771 0.977
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.733 0.791
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.720 0.849
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.720 0.849
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.720 0.849
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.720 0.849
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.709 0.907
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.707 0.500
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.697 0.698
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.540 0.407
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.508 0.360
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSHAP00000015627 ARID/BRIGHT 187 273

Links

Other ARID/BRIGHT family TFs
Other Sarcophilus harrisii TFs

368 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I
BGIOSGA014498 Oryza indica BGIOSGA014498 I
Bo4g197410 Brassica oleracea Bo4g197410 I
Bra040478 Brassica rapa Bra040478 I
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I
GLYMA02G36090 Glycine max GLYMA02G36090 I
GLYMA03G42301 Glycine max GLYMA03G42301 I
GLYMA07G05381 Glycine max GLYMA07G05381 I
GLYMA10G08871 Glycine max GLYMA10G08871 I
GLYMA16G01951 Glycine max GLYMA16G01951 I
GLYMA19G45090 Glycine max GLYMA19G45090 I
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I
LPERR02G22870 Leersia perrieri LPERR02G22870 I
MLOC_66387 Hordeum vulgare MLOC_66387 I
MTR_7g117455 Medicago truncatula MTR_7g117455 I
MTR_8g023990 Medicago truncatula MTR_8g023990 I
OB01G36520 Oryza brachyantha OB01G36520 I
OB02G35380 Oryza brachyantha OB02G35380 I
OB04G29740 Oryza brachyantha OB04G29740 I
OBART04G22880 Oryza barthii OBART04G22880 I
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I
OLONG_000415 Oryza longistaminata OLONG_000415 I
ONIVA04G22030 Oryza nivara ONIVA04G22030 I
OPUNC04G20430 Oryza punctata OPUNC04G20430 I
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I
OS04G0581400 Oryza sativa OS04G0581400 I
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I
TCM_005014 Theobroma cacao TCM_005014 I
TCM_015590 Theobroma cacao TCM_015590 I
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I
TRIUR3_24950 Triticum urartu TRIUR3_24950 I
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I
Cla006845 Citrullus lanatus Cla006845 I
Cla017937 Citrullus lanatus Cla017937 I
Pm024248 Prunus mume Pm024248 I
30068.m002615 Ricinus communis 30068.m002615 I
30076.m004471 Ricinus communis 30076.m004471 I
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I
cassava39049.m1 Manihot esculenta cassava39049.m1 I
Cucsa.241440 Cucumis sativus Cucsa.241440 I
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I
Carubv10001689m.g Capsella rubella Carubv10001689m.g I
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I
PK04952.1 Cannabis sativa PK04952.1 I
PK11025.1 Cannabis sativa PK11025.1 I
PK21157.1 Cannabis sativa PK21157.1 I
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N
ARF31 Arabidopsis thaliana AT2G36080 N
NGA1 Arabidopsis thaliana AT2G46870 N
AT3G11580 Arabidopsis thaliana AT3G11580 N
NGA2 Arabidopsis thaliana AT3G61970 N
AT5G06250 Arabidopsis thaliana AT5G06250 N
BGIOSGA005835 Oryza indica BGIOSGA005835 N
BGIOSGA011738 Oryza indica BGIOSGA011738 N
BGIOSGA031489 Oryza indica BGIOSGA031489 N
BGIOSGA034469 Oryza indica BGIOSGA034469 N
BGIOSGA036599 Oryza indica BGIOSGA036599 N
Bo01079s020 Brassica oleracea Bo01079s020 N
Bo3g003800 Brassica oleracea Bo3g003800 N
Bo3g039420 Brassica oleracea Bo3g039420 N
Bo3g064320 Brassica oleracea Bo3g064320 N
Bo4g006900 Brassica oleracea Bo4g006900 N
Bo4g035110 Brassica oleracea Bo4g035110 N
Bo5g136360 Brassica oleracea Bo5g136360 N
Bo6g079210 Brassica oleracea Bo6g079210 N
Bo9g176470 Brassica oleracea Bo9g176470 N
Bra000434 Brassica rapa Bra000434 N
Bra001411 Brassica rapa Bra001411 N
Bra003482 Brassica rapa Bra003482 N
Bra004501 Brassica rapa Bra004501 N
Bra005301 Brassica rapa Bra005301 N
Bra005886 Brassica rapa Bra005886 N
Bra009171 Brassica rapa Bra009171 N
Bra017262 Brassica rapa Bra017262 N
Bra034828 Brassica rapa Bra034828 N
Bra041023 Brassica rapa Bra041023 N
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N
F775_02500 Aegilops tauschii F775_02500 N
F775_31255 Aegilops tauschii F775_31255 N
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N
GLYMA03G35700 Glycine max GLYMA03G35700 N
GLYMA19G38340 Glycine max GLYMA19G38340 N
GRMZM2G018485 Zea mays GRMZM2G018485 N
GRMZM2G024948 Zea mays GRMZM2G024948 N
GRMZM2G082227 Zea mays GRMZM2G082227 N
GRMZM2G098443 Zea mays GRMZM2G098443 N
GRMZM2G102059 Zea mays GRMZM2G102059 N
GRMZM2G125095 Zea mays GRMZM2G125095 N
GRMZM2G142999 Zea mays GRMZM2G142999 N
GRMZM2G328742 Zea mays GRMZM2G328742 N
GRMZM5G805685 Zea mays GRMZM5G805685 N
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N
LPERR03G01560 Leersia perrieri LPERR03G01560 N
LPERR04G18630 Leersia perrieri LPERR04G18630 N
LPERR10G12990 Leersia perrieri LPERR10G12990 N
LPERR11G03050 Leersia perrieri LPERR11G03050 N
LPERR12G03290 Leersia perrieri LPERR12G03290 N
MLOC_11014 Hordeum vulgare MLOC_11014 N
MLOC_48938 Hordeum vulgare MLOC_48938 N
MLOC_56530 Hordeum vulgare MLOC_56530 N
MLOC_74058 Hordeum vulgare MLOC_74058 N
MTR_1g058350 Medicago truncatula MTR_1g058350 N
MTR_7g105370 Medicago truncatula MTR_7g105370 N
OB03G11610 Oryza brachyantha OB03G11610 N
OB10G24100 Oryza brachyantha OB10G24100 N
OB11G12920 Oryza brachyantha OB11G12920 N
OB12G13420 Oryza brachyantha OB12G13420 N
OBART02G28100 Oryza barthii OBART02G28100 N
OBART03G01650 Oryza barthii OBART03G01650 N
OBART10G17010 Oryza barthii OBART10G17010 N
OBART11G03590 Oryza barthii OBART11G03590 N
OBART12G03490 Oryza barthii OBART12G03490 N
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N
OLONG_005139 Oryza longistaminata OLONG_005139 N
OMERI02G27240 Oryza meridionalis OMERI02G27240 N
OMERI03G01600 Oryza meridionalis OMERI03G01600 N
OMERI10G13480 Oryza meridionalis OMERI10G13480 N
OMERI11G03310 Oryza meridionalis OMERI11G03310 N
OMERI12G01740 Oryza meridionalis OMERI12G01740 N
ONIVA02G30750 Oryza nivara ONIVA02G30750 N
ONIVA07G22860 Oryza nivara ONIVA07G22860 N
ONIVA10G18740 Oryza nivara ONIVA10G18740 N
ONIVA12G03130 Oryza nivara ONIVA12G03130 N
ONIVA12G15340 Oryza nivara ONIVA12G15340 N
OPUNC02G25780 Oryza punctata OPUNC02G25780 N
OPUNC03G01540 Oryza punctata OPUNC03G01540 N
OPUNC10G16940 Oryza punctata OPUNC10G16940 N
OPUNC11G03320 Oryza punctata OPUNC11G03320 N
OPUNC12G03300 Oryza punctata OPUNC12G03300 N
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N
OS02G0683500 Oryza sativa OS02G0683500 N
OS03G0120900 Oryza sativa OS03G0120900 N
OS10G0537100 Oryza sativa OS10G0537100 N
OS11G0156000 Oryza sativa OS11G0156000 N
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N
Sb01g030520 Sorghum bicolor Sb01g030520 N
Sb01g049150 Sorghum bicolor Sb01g049150 N
Sb04g031710 Sorghum bicolor Sb04g031710 N
Sb05g003450 Sorghum bicolor Sb05g003450 N
Sb06g026370 Sorghum bicolor Sb06g026370 N
Sb08g003550 Sorghum bicolor Sb08g003550 N
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N
Si010849m.g Setaria italica Si010849m.g N
Si011823m.g Setaria italica Si011823m.g N
Si020241m.g Setaria italica Si020241m.g N
Si027632m.g Setaria italica Si027632m.g N
Si036864m.g Setaria italica Si036864m.g N
Si039972m.g Setaria italica Si039972m.g N
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N
TCM_022729 Theobroma cacao TCM_022729 N
Traes_2AL_25382F498 Triticum aestivum Traes_2AL_25382F498 N
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N
TRIUR3_01515 Triticum urartu TRIUR3_01515 N
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N
Ca_00826 Cicer arietinum Ca_00826 N
Cla014858 Citrullus lanatus Cla014858 N
Pm028725 Prunus mume Pm028725 N
30032.m000462 Ricinus communis 30032.m000462 N
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N
cassava3990.m1 Manihot esculenta cassava3990.m1 N
Cucsa.106780 Cucumis sativus Cucsa.106780 N
Cucsa.349830 Cucumis sativus Cucsa.349830 N
mgf018965m Mimulus guttatus mgf018965m N
mgf019085m Mimulus guttatus mgf019085m N
mgf023769m Mimulus guttatus mgf023769m N
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N
Carubv10014376m.g Capsella rubella Carubv10014376m.g N
Carubv10023656m.g Capsella rubella Carubv10023656m.g N
Carubv10023925m.g Capsella rubella Carubv10023925m.g N
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N
Lus10004226.g Linum usitatissimum Lus10004226.g N
Lus10021326.g Linum usitatissimum Lus10021326.g N
MDP0000229742 Malus domestica MDP0000229742 N
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N
Pavir.J06582 Panicum virgatum Pavir.J06582 N
Pavir.J27608 Panicum virgatum Pavir.J27608 N
Pavir.J35382 Panicum virgatum Pavir.J35382 N
Pavir.J38226 Panicum virgatum Pavir.J38226 N
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N