ENSPFOG00000003609 (Poecilia formosa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPFOG00000003609 T106122_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.823 0.956
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.823 0.956
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.804 0.921
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.804 0.921
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.804 0.921
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPFOP00000003603 C2H2 ZF 411 432
ENSPFOP00000003603 C2H2 ZF 438 460
ENSPFOP00000003603 C2H2 ZF 725 747
ENSPFOP00000003603 C2H2 ZF 753 775
ENSPFOP00000003603 C2H2 ZF 783 806

Links

Other C2H2 ZF family TFs
Other Poecilia formosa TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB2D Arabidopsis thaliana AT1G75490 D
DREB2G Arabidopsis thaliana AT5G18450 D
PK07402.1 Cannabis sativa PK07402.1 D
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I
AT2G40350 Arabidopsis thaliana AT2G40350 I
Bo2g016490 Brassica oleracea Bo2g016490 I
Bo2g083920 Brassica oleracea Bo2g083920 I
Bo3g013160 Brassica oleracea Bo3g013160 I
Bo6g086320 Brassica oleracea Bo6g086320 I
Bo6g119660 Brassica oleracea Bo6g119660 I
Bo9g155940 Brassica oleracea Bo9g155940 I
Bra002159 Brassica rapa Bra002159 I
Bra003752 Brassica rapa Bra003752 I
Bra006460 Brassica rapa Bra006460 I
Bra008200 Brassica rapa Bra008200 I
Bra015840 Brassica rapa Bra015840 I
Bra023674 Brassica rapa Bra023674 I
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I
GLYMA04G03070 Glycine max GLYMA04G03070 I
GLYMA06G03110 Glycine max GLYMA06G03110 I
GLYMA14G07620 Glycine max GLYMA14G07620 I
GLYMA17G37350 Glycine max GLYMA17G37350 I
GRMZM2G028386 Zea mays GRMZM2G028386 I
GRMZM2G156737 Zea mays GRMZM2G156737 I
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I
MTR_1g023170 Medicago truncatula MTR_1g023170 I
MTR_3g112440 Medicago truncatula MTR_3g112440 I
MTR_5g083340 Medicago truncatula MTR_5g083340 I
PGSC0003DMG400003706 Solanum tuberosum PGSC0003DMG400003706 I
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I
Sb07g023575 Sorghum bicolor Sb07g023575 I
DREB2C Arabidopsis lyrata scaffold_402826.1 I
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I
Solyc04g080910.1 Solanum lycopersicum Solyc04g080910.1 I
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I
TCM_026121 Theobroma cacao TCM_026121 I
TCM_034132 Theobroma cacao TCM_034132 I
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I
Ca_10770 Cicer arietinum Ca_10770 I
Cla006713 Citrullus lanatus Cla006713 I
Cla021113 Citrullus lanatus Cla021113 I
Cla022803 Citrullus lanatus Cla022803 I
Pm003634 Prunus mume Pm003634 I
Pm006274 Prunus mume Pm006274 I
29680.m001737 Ricinus communis 29680.m001737 I
29729.m002292 Ricinus communis 29729.m002292 I
30170.m014115 Ricinus communis 30170.m014115 I
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I
cassava25887.m1 Manihot esculenta cassava25887.m1 I
cassava41240.m1 Manihot esculenta cassava41240.m1 I
cassava45031.m1 Manihot esculenta cassava45031.m1 I
Cucsa.136780 Cucumis sativus Cucsa.136780 I
Cucsa.231820 Cucumis sativus Cucsa.231820 I
Cucsa.342750 Cucumis sativus Cucsa.342750 I
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I
mgf007881m Mimulus guttatus mgf007881m I
mgf017629m Mimulus guttatus mgf017629m I
mgf024545m Mimulus guttatus mgf024545m I
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I
Carubv10002425m.g Capsella rubella Carubv10002425m.g I
Carubv10020960m.g Capsella rubella Carubv10020960m.g I
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I
Lus10003581.g Linum usitatissimum Lus10003581.g I
Lus10006127.g Linum usitatissimum Lus10006127.g I
Lus10010632.g Linum usitatissimum Lus10010632.g I
Lus10012226.g Linum usitatissimum Lus10012226.g I
Lus10023633.g Linum usitatissimum Lus10023633.g I
Lus10024298.g Linum usitatissimum Lus10024298.g I
Lus10034902.g Linum usitatissimum Lus10034902.g I
MDP0000141335 Malus domestica MDP0000141335 I
MDP0000153866 Malus domestica MDP0000153866 I
MDP0000223609 Malus domestica MDP0000223609 I
MDP0000250924 Malus domestica MDP0000250924 I
MDP0000250927 Malus domestica MDP0000250927 I
MDP0000295902 Malus domestica MDP0000295902 I
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I
SapurV1A.0001s0300 Salix purpurea SapurV1A.0001s0300 I
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I
PK07829.1 Cannabis sativa PK07829.1 I
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I
MDP0000293996 Malus domestica MDP0000293996 N