SELMODRAFT_27203 (Selaginella moellendorffii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 SELMODRAFT_27203 T005147_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.710 0.796
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.695 0.796
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.694 0.796
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.692 0.796
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.692 0.796
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.692 0.796
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.692 0.796
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.684 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ37838 AP2 31 82

Links

Other AP2 family TFs
Other Selaginella moellendorffii TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27810.m000639 Ricinus communis 27810.m000639 I 0.705
29729.m002292 Ricinus communis 29729.m002292 I 0.702
30170.m014115 Ricinus communis 30170.m014115 I 0.692
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.691
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.705
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.695
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.677
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.701
Bo2g083920 Brassica oleracea Bo2g083920 I 0.697
Bo4g111040 Brassica oleracea Bo4g111040 I 0.678
Bo6g073020 Brassica oleracea Bo6g073020 I 0.684
Bo6g086320 Brassica oleracea Bo6g086320 I 0.696
Bo6g119660 Brassica oleracea Bo6g119660 I 0.692
Bo8g092010 Brassica oleracea Bo8g092010 I 0.684
Bo9g155940 Brassica oleracea Bo9g155940 I 0.694
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.684
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.694
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.692
Bra002159 Brassica rapa Bra002159 I 0.694
Bra003752 Brassica rapa Bra003752 I 0.696
Bra007341 Brassica rapa Bra007341 I 0.684
Bra008200 Brassica rapa Bra008200 I 0.697
Bra014617 Brassica rapa Bra014617 I 0.678
Bra015840 Brassica rapa Bra015840 I 0.692
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.701
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.680
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.684
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.687
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.692
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.687
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.684
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.692
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.705
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.710
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.679
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.705
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.692
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.687
Ca_07264 Cicer arietinum Ca_07264 I 0.705
Ca_10770 Cicer arietinum Ca_10770 I 0.696
Ca_12446 Cicer arietinum Ca_12446 I 0.687
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.692
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.705
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.684
Cla006713 Citrullus lanatus Cla006713 I 0.716
Cla012194 Citrullus lanatus Cla012194 I 0.680
Cla021113 Citrullus lanatus Cla021113 I 0.690
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.717
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.693
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.688
DREB2D Arabidopsis thaliana AT1G75490 D 0.692
DREB2E Oryza sativa OS03G0174400 I 0.701
DREB2F Arabidopsis thaliana AT3G57600 D 0.684
DREB2G Arabidopsis thaliana AT5G18450 D 0.694
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.704
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.689
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.707
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.708
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.687
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.711
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.688
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.678
F775_02345 Aegilops tauschii F775_02345 I 0.678
F775_05774 Aegilops tauschii F775_05774 I 0.692
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.692
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.684
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.684
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.697
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.716
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.705
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.701
GLYMA02G42960 Glycine max GLYMA02G42960 I 0.681
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.705
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.696
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.696
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.701
GLYMA14G06080 Glycine max GLYMA14G06080 I 0.681
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.688
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.701
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.688
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.705
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.697
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.707
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.713
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.697
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.699
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.684
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.684
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.703
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.701
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.701
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.722
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.690
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.686
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.690
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.725
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.705
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.705
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.746
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.696
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.681
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.709
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.711
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.711
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.712
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.690
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.690
MDP0000141335 Malus domestica MDP0000141335 I 0.695
MDP0000250924 Malus domestica MDP0000250924 I 0.689
MDP0000250927 Malus domestica MDP0000250927 I 0.707
MDP0000290585 Malus domestica MDP0000290585 I 0.680
MDP0000295902 Malus domestica MDP0000295902 I 0.695
MDP0000703626 Malus domestica MDP0000703626 I 0.713
MDP0000871361 Malus domestica MDP0000871361 I 0.713
mgf007881m Mimulus guttatus mgf007881m I 0.691
mgf017629m Mimulus guttatus mgf017629m I 0.712
mgf024545m Mimulus guttatus mgf024545m I 0.693
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.678
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.692
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.696
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.694
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.704
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.705
OBART03G05550 Oryza barthii OBART03G05550 I 0.701
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.701
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.701
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.701
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.701
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.684
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.692
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.705
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.701
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.701
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.701
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.678
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.678
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.700
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.705
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.696
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.708
PK07402.1 Cannabis sativa PK07402.1 D 0.710
PK07829.1 Cannabis sativa PK07829.1 I 0.718
PK08602.1 Cannabis sativa PK08602.1 D 0.695
Pm003634 Prunus mume Pm003634 I 0.714
Pm006274 Prunus mume Pm006274 I 0.693
Pm015262 Prunus mume Pm015262 I 0.685
Pm025865 Prunus mume Pm025865 I 0.713
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.694
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.684
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.701
POPTR_0006s10510 Populus trichocarpa POPTR_0006s10510 I 0.677
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.711
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.708
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.705
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.713
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.685
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.689
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.711
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.692
SapurV1A.0001s0300 Salix purpurea SapurV1A.0001s0300 I 0.683
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.705
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.707
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.692
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.701
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.722
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.701
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.722
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.685
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.694
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.681
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.806
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.681
Si024059m.g Setaria italica Si024059m.g I 0.678
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.708
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.696
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.680
TCM_024756 Theobroma cacao TCM_024756 I 0.705
TCM_034132 Theobroma cacao TCM_034132 I 0.683
TCM_043275 Theobroma cacao TCM_043275 I 0.677
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.684
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.694
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.698
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.692
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.692
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.683
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.678
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.692
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.701
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.678
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.692
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.705
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.711
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.683