GLYMA05G03560 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA05G03560 T001788_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.682 0.725
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA05G03560.2 AP2 91 143

Links

Other AP2 family TFs
Other Glycine max TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.837
MTR_4g102660 Medicago truncatula MTR_4g102660 I 0.823
Ca_08732 Cicer arietinum Ca_08732 I 0.802
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.756
LjSGA_077560.1 Lotus japonicus LjSGA_077560.1 N 0.754
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.751
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.750
GLYMA01G42500 Glycine max GLYMA01G42500 I 0.748
MDP0000198054 Malus domestica MDP0000198054 I 0.746
Pm023772 Prunus mume Pm023772 I 0.743
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.740
Lus10017829.g Linum usitatissimum Lus10017829.g I 0.739
30190.m011119 Ricinus communis 30190.m011119 I 0.738
Pm023775 Prunus mume Pm023775 I 0.736
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.736
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.735
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.735
Cla011674 Citrullus lanatus Cla011674 I 0.734
MDP0000154764 Malus domestica MDP0000154764 I 0.733
chr2.CM0304.640.nd Lotus japonicus chr2.CM0304.640.nd I 0.729
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.728
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.726
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.721
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.717
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.716
Pm023769 Prunus mume Pm023769 I 0.716
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.710
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.709
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.706
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.702
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.701
mgf026642m Mimulus guttatus mgf026642m I 0.699
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I 0.697
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.697
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.697
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.696
30190.m011120 Ricinus communis 30190.m011120 I 0.696
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.696
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.695
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.695
PK23332.1 Cannabis sativa PK23332.1 I 0.693
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.693
mgf019061m Mimulus guttatus mgf019061m I 0.692
mgf017136m Mimulus guttatus mgf017136m I 0.692
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.691
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.691
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.691
GLYMA11G19341 Glycine max GLYMA11G19341 I 0.687
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.687
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.685
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.685
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.685
TCM_016175 Theobroma cacao TCM_016175 I 0.684
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.683
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.682
Cagra.23885s0001 Capsella grandiflora Cagra.23885s0001 I 0.682
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.682
Carubv10021910m.g Capsella rubella Carubv10021910m.g I 0.682
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.682
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.681
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.681
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.681
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.680
Cla006315 Citrullus lanatus Cla006315 I 0.680
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.680
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.679
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.677