PK23332.1 (Cannabis sativa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 PK23332.1 T010098_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.805 0.940
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.805 0.940
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.805 0.940
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.805 0.940
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.795 0.920
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.795 0.920
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.783 0.920
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.783 0.920
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.783 0.920
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.737 0.820
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.737 0.820
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.726 0.780
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.726 0.780
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.726 0.780
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.726 0.780
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.726 0.780
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.726 0.780
Q8S2T3_BRANA
M09745_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF16_01 		0.702 0.900
Q6T3U0_BRANA
M09743_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBII1_01 		0.702 0.900
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.697 0.740
DREB1E
M09709_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1E_01 		0.691 0.820
DREB1B
M06643_2.00 		Arabidopsis thaliana
DHBRCCGACRHN
NDYGTCGGYVDH		 Dap-seq
OMalley et al.(2016)
CBF1_col_a 		0.684 0.900
DREB1B
M06644_2.00 		Arabidopsis thaliana
NNNHBRCCGACAWNN
NNWTGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF1_colamp_a 		0.684 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK23332.1 AP2 66 117

Links

Other AP2 family TFs
Other Cannabis sativa TFs

215 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.841
mgf026642m Mimulus guttatus mgf026642m I 0.835
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.833
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.830
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.830
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.829
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.828
Cla006315 Citrullus lanatus Cla006315 I 0.826
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.826
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.826
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.826
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.820
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.820
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.818
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.814
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.812
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.812
Cla002362 Citrullus lanatus Cla002362 I 0.809
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.805
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.805
DREB1A Arabidopsis thaliana AT4G25480 D 0.805
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.804
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.804
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.804
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.804
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.804
30147.m014313 Ricinus communis 30147.m014313 I 0.800
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.799
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.798
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.798
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.798
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.795
Bra028290 Brassica rapa Bra028290 I 0.795
DREB1D Arabidopsis thaliana AT5G51990 D 0.795
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.795
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.795
Bo9g104770 Brassica oleracea Bo9g104770 I 0.795
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.795
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.795
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.791
Cla011674 Citrullus lanatus Cla011674 I 0.790
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.788
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.788
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.788
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.783
DREB1C Arabidopsis thaliana AT4G25470 D 0.783
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.783
mgf017136m Mimulus guttatus mgf017136m I 0.781
MDP0000154764 Malus domestica MDP0000154764 I 0.778
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.778
MDP0000198054 Malus domestica MDP0000198054 I 0.777
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.776
Pm023775 Prunus mume Pm023775 I 0.775
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.775
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.775
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.775
Carubv10006965m.g Capsella rubella Carubv10006965m.g I 0.774
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.773
TCM_016175 Theobroma cacao TCM_016175 I 0.773
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.773
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.773
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.773
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.767
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.767
mgf019061m Mimulus guttatus mgf019061m I 0.766
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.765
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.764
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.761
Pm023769 Prunus mume Pm023769 I 0.760
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.760
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.760
Pm023772 Prunus mume Pm023772 I 0.756
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.756
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.755
30190.m011120 Ricinus communis 30190.m011120 I 0.752
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.751
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.751
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.750
Pm019386 Prunus mume Pm019386 I 0.749
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.747
60638.m00016 Ricinus communis 60638.m00016 I 0.747
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.745
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.743
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.743
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.743
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.742
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.742
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.742
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.742
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.742
30190.m011119 Ricinus communis 30190.m011119 I 0.741
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.740
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.740
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.740
MTR_6g465530 Medicago truncatula MTR_6g465530 I 0.739
Ca_04504 Cicer arietinum Ca_04504 I 0.738
OBART02G27760 Oryza barthii OBART02G27760 I 0.737
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.737
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.737
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.737
DREB1G Oryza sativa OS02G0677300 D 0.737
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.737
DREB1G Oryza indica BGIOSGA008804 I 0.737
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.737
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.737
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.737
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.737
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.737
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.737
mgf026339m Mimulus guttatus mgf026339m I 0.736
Lus10029602.g Linum usitatissimum Lus10029602.g I 0.735
Lus10006334.g Linum usitatissimum Lus10006334.g I 0.735
Lus10029601.g Linum usitatissimum Lus10029601.g I 0.735
Lus10001871.g Linum usitatissimum Lus10001871.g I 0.735
Lus10006332.g Linum usitatissimum Lus10006332.g I 0.735
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.732
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.732
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.732
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.731
MTR_6g465450 Medicago truncatula MTR_6g465450 I 0.731
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.730
Bra026963 Brassica rapa Bra026963 I 0.730
Bra016763 Brassica rapa Bra016763 I 0.730
Bo01335s010 Brassica oleracea Bo01335s010 I 0.730
Bo8g108050 Brassica oleracea Bo8g108050 I 0.730
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.729
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.729
Si018262m.g Setaria italica Si018262m.g I 0.727
DREB1F Arabidopsis thaliana AT1G12610 D 0.726
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.726
mgf018934m Mimulus guttatus mgf018934m I 0.725
mgf022408m Mimulus guttatus mgf022408m I 0.725
mgf018631m Mimulus guttatus mgf018631m I 0.725
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.725
mgf016974m Mimulus guttatus mgf016974m I 0.725
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.724
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.724
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.722
evm.TU.supercontig_5.66 Carica papaya evm.TU.supercontig_5.66 I 0.722
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I 0.722
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.721
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.720
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.720
GSMUA_Achr7G05900_001 Musa acuminata GSMUA_Achr7G05900_001 I 0.719
Carubv10010303m.g Capsella rubella Carubv10010303m.g I 0.718
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I 0.718
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.717
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.717
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.717
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.717
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.717
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I 0.715
AMTR_s00095p00096190 Amborella trichopoda AMTR_s00095p00096190 I 0.713
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I 0.713
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.712
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.711
Ca_18948 Cicer arietinum Ca_18948 I 0.710
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.710
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.709
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.708
MTR_6g465850 Medicago truncatula MTR_6g465850 I 0.708
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.707
PGSC0003DMG400038366 Solanum tuberosum PGSC0003DMG400038366 I 0.706
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.706
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.706
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.706
GLYMA16G32330 Glycine max GLYMA16G32330 I 0.705
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.704
AMTR_s00069p00141520 Amborella trichopoda AMTR_s00069p00141520 I 0.703
Bra019162 Brassica rapa Bra019162 I 0.702
Q8S2T3_BRANA Brassica napus Q8S2T3_BRANA D 0.702
Q6T3U0_BRANA Brassica napus Q6T3U0_BRANA D 0.702
Bo7g110320 Brassica oleracea Bo7g110320 I 0.702
Lus10017829.g Linum usitatissimum Lus10017829.g I 0.701
Bra022770 Brassica rapa Bra022770 I 0.699
GLYMA01G42500 Glycine max GLYMA01G42500 I 0.699
Gorai.008G280600 Gossypium raimondii Gorai.008G280600 I 0.698
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.697
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.697
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.697
Solyc01g009440.1 Solanum lycopersicum Solyc01g009440.1 I 0.695
GLYMA11G19341 Glycine max GLYMA11G19341 I 0.695
Aquca_122_00012 Aquilegia coerulea Aquca_122_00012 I 0.695
GLYMA05G03560 Glycine max GLYMA05G03560 I 0.693
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.693
DREB1E Oryza sativa OS04G0572400 D 0.691
OPUNC04G19970 Oryza punctata OPUNC04G19970 I 0.691
ORGLA04G0192900 Oryza glaberrima ORGLA04G0192900 I 0.691
ORUFI04G23890 Oryza rufipogon ORUFI04G23890 I 0.691
OMERI04G18770 Oryza meridionalis OMERI04G18770 I 0.691
OGLUM04G22260 Oryza glumaepatula OGLUM04G22260 I 0.691
ONIVA04G20840 Oryza nivara ONIVA04G20840 I 0.691
OBART04G22220 Oryza barthii OBART04G22220 I 0.691
DREB1E Oryza indica BGIOSGA016950 I 0.691
LPERR04G18190 Leersia perrieri LPERR04G18190 I 0.691
Bo5g016750 Brassica oleracea Bo5g016750 I 0.690
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.690
MTR_4g102660 Medicago truncatula MTR_4g102660 I 0.690
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.690
Bra019777 Brassica rapa Bra019777 I 0.689
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.688
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.686
chr2.CM0304.640.nd Lotus japonicus chr2.CM0304.640.nd I 0.685
Aquca_122_00013 Aquilegia coerulea Aquca_122_00013 I 0.685
Ca_08732 Cicer arietinum Ca_08732 I 0.684
DREB1B Arabidopsis thaliana AT4G25490 D 0.684
GSMUA_Achr4G19660_001 Musa acuminata GSMUA_Achr4G19660_001 I 0.684
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I 0.682
Eucgr.A02825 Eucalyptus grandis Eucgr.A02825 I 0.682
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.681
mgf017477m Mimulus guttatus mgf017477m N 0.681
Carubv10006809m.g Capsella rubella Carubv10006809m.g I 0.681
Carubv10021910m.g Capsella rubella Carubv10021910m.g I 0.679
Cagra.23885s0001 Capsella grandiflora Cagra.23885s0001 I 0.679
GSMUA_Achr10G15510_001 Musa acuminata GSMUA_Achr10G15510_001 I 0.678