GLYMA12G30740 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA12G30740 T001921_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.785 0.840
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.785 0.840
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.749 0.780
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.749 0.780
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.749 0.780
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.749 0.780
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.749 0.780
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.749 0.780
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.746 0.760
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.746 0.760
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.746 0.760
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.724 0.780
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.724 0.780
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.724 0.780
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.724 0.780
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.720 0.740
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.686 0.740
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.686 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA12G30740.2 AP2 76 127

Links

Other AP2 family TFs
Other Glycine max TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.838
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.816
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.814
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.814
GLYMA11G19341 Glycine max GLYMA11G19341 I 0.802
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.801
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.793
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.793
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.788
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.788
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.788
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.788
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.785
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.785
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.785
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.785
Bo9g104770 Brassica oleracea Bo9g104770 I 0.785
Bra028290 Brassica rapa Bra028290 I 0.785
DREB1D Arabidopsis thaliana AT5G51990 D 0.785
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.785
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.784
60638.m00016 Ricinus communis 60638.m00016 I 0.780
30190.m011119 Ricinus communis 30190.m011119 I 0.772
Cla002362 Citrullus lanatus Cla002362 I 0.772
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.771
Aquca_122_00013 Aquilegia coerulea Aquca_122_00013 I 0.771
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.771
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.771
Aquca_122_00012 Aquilegia coerulea Aquca_122_00012 I 0.770
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I 0.769
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.767
Lus10029602.g Linum usitatissimum Lus10029602.g I 0.765
Lus10006332.g Linum usitatissimum Lus10006332.g I 0.765
Lus10001871.g Linum usitatissimum Lus10001871.g I 0.765
Lus10029601.g Linum usitatissimum Lus10029601.g I 0.765
Lus10006334.g Linum usitatissimum Lus10006334.g I 0.765
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.763
MDP0000198054 Malus domestica MDP0000198054 I 0.760
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.759
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.759
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.759
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.758
30190.m011120 Ricinus communis 30190.m011120 I 0.756
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.755
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.754
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.754
mgf026642m Mimulus guttatus mgf026642m I 0.753
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.753
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.753
Cla006315 Citrullus lanatus Cla006315 I 0.753
Cla011674 Citrullus lanatus Cla011674 I 0.751
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.750
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.750
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.750
MDP0000154764 Malus domestica MDP0000154764 I 0.750
Pm023775 Prunus mume Pm023775 I 0.750
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.750
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.749
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.749
DREB1F Arabidopsis thaliana AT1G12610 D 0.749
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.748
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I 0.748
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.747
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.747
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.747
PK23332.1 Cannabis sativa PK23332.1 I 0.747
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.747
DREB1C Arabidopsis thaliana AT4G25470 D 0.746
Bra016763 Brassica rapa Bra016763 I 0.746
Bo01335s010 Brassica oleracea Bo01335s010 I 0.746
AMTR_s00095p00096190 Amborella trichopoda AMTR_s00095p00096190 I 0.745
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.745
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.744
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.744
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.743
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.742
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I 0.741
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.741
Carubv10010303m.g Capsella rubella Carubv10010303m.g I 0.741
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.740
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.739
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.738
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.737
Bra026963 Brassica rapa Bra026963 I 0.737
Bo8g108050 Brassica oleracea Bo8g108050 I 0.737
Pm023772 Prunus mume Pm023772 I 0.736
Pm023769 Prunus mume Pm023769 I 0.735
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.735
mgf017136m Mimulus guttatus mgf017136m I 0.734
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.734
30147.m014313 Ricinus communis 30147.m014313 I 0.733
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.732
mgf026339m Mimulus guttatus mgf026339m I 0.732
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.730
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I 0.729
TCM_016175 Theobroma cacao TCM_016175 I 0.728
Solyc01g009440.1 Solanum lycopersicum Solyc01g009440.1 I 0.727
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.726
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.726
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.726
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.724
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.724
DREB1A Arabidopsis thaliana AT4G25480 D 0.724
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.723
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.723
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.723
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.723
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.723
Ca_18948 Cicer arietinum Ca_18948 I 0.723
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.722
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.721
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.720
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.720
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.720
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I 0.718
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.717
mgf019061m Mimulus guttatus mgf019061m I 0.717
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.717
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.717
PGSC0003DMG400038366 Solanum tuberosum PGSC0003DMG400038366 I 0.716
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.716
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.716
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.715
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.714
GSMUA_Achr10G15510_001 Musa acuminata GSMUA_Achr10G15510_001 I 0.714
Bra027612 Brassica rapa Bra027612 I 0.713
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.712
TCM_041493 Theobroma cacao TCM_041493 N 0.712
Carubv10006965m.g Capsella rubella Carubv10006965m.g I 0.711
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.711
GSMUA_Achr2G20280_001 Musa acuminata GSMUA_Achr2G20280_001 I 0.709
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.707
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.707
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.706
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.706
AMTR_s00040p00195730 Amborella trichopoda AMTR_s00040p00195730 I 0.703
Cagra.23885s0001 Capsella grandiflora Cagra.23885s0001 I 0.702
Carubv10021910m.g Capsella rubella Carubv10021910m.g I 0.702
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.700
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.700
chr2.CM0304.640.nd Lotus japonicus chr2.CM0304.640.nd I 0.699
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.698
MTR_6g465850 Medicago truncatula MTR_6g465850 I 0.698
Bo5g016750 Brassica oleracea Bo5g016750 I 0.697
MTR_6g465450 Medicago truncatula MTR_6g465450 I 0.697
MTR_6g465530 Medicago truncatula MTR_6g465530 I 0.695
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.694
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.693
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.693
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.693
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.692
GSMUA_Achr4G19660_001 Musa acuminata GSMUA_Achr4G19660_001 I 0.691
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.691
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.691
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.691
Ca_08732 Cicer arietinum Ca_08732 I 0.689
Gorai.003G162700 Gossypium raimondii Gorai.003G162700 I 0.688
evm.TU.supercontig_5.66 Carica papaya evm.TU.supercontig_5.66 I 0.687
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.687
DREB1G Oryza indica BGIOSGA008804 I 0.686
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.686
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.686
DREB1G Oryza sativa OS02G0677300 D 0.686
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.686
OBART02G27760 Oryza barthii OBART02G27760 I 0.686
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.686
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.686
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.686
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.686
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.686
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.686
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.686
Aquca_027_00400 Aquilegia coerulea Aquca_027_00400 N 0.684
VIT_06s0061g01390 Vitis vinifera VIT_06s0061g01390 I 0.681
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.678
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.678
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.678
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.678
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.678