OBART05G01640 (Oryza barthii)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 OBART05G01640 T245545_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART05G01640.1 LOB 36 87

Links

Other LOB family TFs
Other Oryza barthii TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI05G01740 Oryza meridionalis OMERI05G01740 N 0.981
OPUNC05G01610 Oryza punctata OPUNC05G01610 N 0.961
OB05G11740 Oryza brachyantha OB05G11740 I 0.904
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.885
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.885
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.885
Si024430m.g Setaria italica Si024430m.g N 0.885
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.885
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.865
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.865
OBART03G13260 Oryza barthii OBART03G13260 N 0.846
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.846
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.846
OS03G0287400 Oryza sativa OS03G0287400 N 0.846
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.846
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.846
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.846
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.846
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.846
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.846
Bo5g008590 Brassica oleracea Bo5g008590 N 0.846
MDP0000151784 Malus domestica MDP0000151784 I 0.846
Bra018675 Brassica rapa Bra018675 N 0.846
MDP0000123013 Malus domestica MDP0000123013 I 0.846
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.846
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.846
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.827
TCM_043081 Theobroma cacao TCM_043081 I 0.827
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.827
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.827
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.827
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.827
F775_02335 Aegilops tauschii F775_02335 N 0.827
Pm018585 Prunus mume Pm018585 I 0.827
Pm000938 Prunus mume Pm000938 I 0.827
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.827
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.827
mgf022524m Mimulus guttatus mgf022524m N 0.827
OB03G23270 Oryza brachyantha OB03G23270 N 0.827
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.827
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.827
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.827
mgf015666m Mimulus guttatus mgf015666m N 0.808
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.808
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.808
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.808
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.808
Cla000556 Citrullus lanatus Cla000556 I 0.808
MDP0000218986 Malus domestica MDP0000218986 I 0.808
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.808
Gorai.012G185900 Gossypium raimondii Gorai.012G185900 N 0.808
MDP0000318244 Malus domestica MDP0000318244 I 0.808
MDP0000879799 Malus domestica MDP0000879799 N 0.808
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.808
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.808
Gorai.004G023900 Gossypium raimondii Gorai.004G023900 N 0.808
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.808
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.808
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.808
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.808
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.808
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.808
Bra031599 Brassica rapa Bra031599 N 0.808
LBD11 Arabidopsis thaliana AT2G28500 N 0.808
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.808
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.788
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.788
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.788
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.788
Ca_04287 Cicer arietinum Ca_04287 I 0.788
MDP0000822986 Malus domestica MDP0000822986 I 0.788
Bra011942 Brassica rapa Bra011942 N 0.788
Bo01039s010 Brassica oleracea Bo01039s010 N 0.788
Bra035698 Brassica rapa Bra035698 N 0.788
orange1.1g047530m.g Citrus sinensis orange1.1g047530m.g I 0.788
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.788
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.788
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.788
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.788
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.788
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.788
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.788
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.788
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.788
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.788
Cla005133 Citrullus lanatus Cla005133 N 0.788
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.788
Cla005134 Citrullus lanatus Cla005134 N 0.788
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.788
Bo3g040220 Brassica oleracea Bo3g040220 N 0.769
Ca_02507 Cicer arietinum Ca_02507 N 0.769
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.769
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.769
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.750
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.750
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.750
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.750
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.745
OLONG_014851 Oryza longistaminata OLONG_014851 N 0.714
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.712
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.712
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.712
Eucgr.E02410 Eucalyptus grandis Eucgr.E02410 N 0.712