Lus10011645.g (Linum usitatissimum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Lus10011645.g T247026_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD4
M02261_2.00 		Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB		 PBM
Weirauch et al.(2014)
pTH7515 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10011645 LOB 51 149

Links

Other LOB family TFs
Other Linum usitatissimum TFs

283 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10036130.g Linum usitatissimum Lus10036130.g I 1.000
MDP0000319331 Malus domestica MDP0000319331 I 0.909
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.899
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.899
30111.m000703 Ricinus communis 30111.m000703 I 0.899
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.899
TCM_041094 Theobroma cacao TCM_041094 I 0.899
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.899
MDP0000218986 Malus domestica MDP0000218986 I 0.899
MDP0000318244 Malus domestica MDP0000318244 I 0.899
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.899
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.899
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.899
Pm000938 Prunus mume Pm000938 I 0.899
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.889
PK27389.1 Cannabis sativa PK27389.1 I 0.889
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.889
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.889
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.879
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.879
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.879
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.879
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.879
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.879
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.879
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.879
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.879
Ca_14605 Cicer arietinum Ca_14605 I 0.879
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.869
mgf015666m Mimulus guttatus mgf015666m N 0.869
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.869
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.869
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.869
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.869
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.869
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.869
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.869
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.859
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.859
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.859
Cla000556 Citrullus lanatus Cla000556 I 0.859
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.859
TCM_043081 Theobroma cacao TCM_043081 I 0.859
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.859
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.859
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.859
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.859
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.859
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N 0.859
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.859
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.859
LBD11 Arabidopsis thaliana AT2G28500 N 0.859
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.848
Bra011942 Brassica rapa Bra011942 N 0.848
Ca_04287 Cicer arietinum Ca_04287 I 0.848
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.848
PK23777.1 Cannabis sativa PK23777.1 I 0.848
Bo01039s010 Brassica oleracea Bo01039s010 N 0.848
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.848
Bra000491 Brassica rapa Bra000491 N 0.848
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.848
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.848
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.848
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.848
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.848
evm.TU.contig_40341.1 Carica papaya evm.TU.contig_40341.1 I 0.846
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.838
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.838
OB05G11740 Oryza brachyantha OB05G11740 I 0.838
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.838
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.838
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.838
Bo4g165420 Brassica oleracea Bo4g165420 N 0.838
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.838
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.838
Bra035698 Brassica rapa Bra035698 N 0.838
Bo3g040220 Brassica oleracea Bo3g040220 N 0.838
Gorai.012G185900 Gossypium raimondii Gorai.012G185900 N 0.830
Cla005134 Citrullus lanatus Cla005134 N 0.828
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.828
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.828
Ca_02507 Cicer arietinum Ca_02507 N 0.828
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.828
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.828
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.828
Bo5g008590 Brassica oleracea Bo5g008590 N 0.828
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.828
Pm018585 Prunus mume Pm018585 I 0.828
Bra018675 Brassica rapa Bra018675 N 0.828
PK17019.1 Cannabis sativa PK17019.1 I 0.824
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.818
Solyc06g075330.1 Solanum lycopersicum Solyc06g075330.1 N 0.818
Si024430m.g Setaria italica Si024430m.g N 0.818
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.818
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.818
Cla020379 Citrullus lanatus Cla020379 I 0.818
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.818
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.818
MDP0000879799 Malus domestica MDP0000879799 N 0.818
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.818
Eucgr.E02410 Eucalyptus grandis Eucgr.E02410 N 0.812
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.808
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.808
MDP0000822986 Malus domestica MDP0000822986 I 0.808
Bo8g112780 Brassica oleracea Bo8g112780 N 0.808
MDP0000151784 Malus domestica MDP0000151784 I 0.808
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.808
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.808
MDP0000123013 Malus domestica MDP0000123013 I 0.808
BGIOSGA018905 Oryza indica BGIOSGA018905 I 0.807
ORUFI05G01750 Oryza rufipogon ORUFI05G01750 I 0.807
OS05G0123000 Oryza sativa OS05G0123000 I 0.807
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.798
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.798
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.798
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.798
Bra031599 Brassica rapa Bra031599 N 0.798
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.798
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.798
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.788
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.788
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.788
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.788
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.788
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.788
Si037280m.g Setaria italica Si037280m.g N 0.788
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.787
OPUNC05G01600 Oryza punctata OPUNC05G01600 N 0.780
PDK_20s1376911g004 Phoenix dactylifera PDK_20s1376911g004 I 0.778
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.778
VIT_13s0019g03760 Vitis vinifera VIT_13s0019g03760 N 0.778
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.778
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.778
mgf019622m Mimulus guttatus mgf019622m N 0.778
POPTR_0005s10050 Populus trichocarpa POPTR_0005s10050 I 0.769
OB03G23270 Oryza brachyantha OB03G23270 N 0.768
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.768
OBART03G13260 Oryza barthii OBART03G13260 N 0.768
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.768
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.768
mgf022524m Mimulus guttatus mgf022524m N 0.768
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N 0.768
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.768
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.768
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.768
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.768
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.768
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.768
OS03G0287400 Oryza sativa OS03G0287400 N 0.768
OMERI05G01730 Oryza meridionalis OMERI05G01730 N 0.767
OPUNC05G01610 Oryza punctata OPUNC05G01610 N 0.765
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.758
Cla005133 Citrullus lanatus Cla005133 N 0.758
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.758
BRADI4G44850 Brachypodium distachyon BRADI4G44850 I 0.758
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.758
PK09808.1 Cannabis sativa PK09808.1 I 0.750
OBART05G01640 Oryza barthii OBART05G01640 N 0.750
Cucsa.239660 Cucumis sativus Cucsa.239660 I 0.747
Cucsa.207390 Cucumis sativus Cucsa.207390 N 0.747
F775_02335 Aegilops tauschii F775_02335 N 0.747
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N 0.747
VIT_13s0019g03800 Vitis vinifera VIT_13s0019g03800 N 0.747
evm.TU.contig_40341.2 Carica papaya evm.TU.contig_40341.2 N 0.739
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.737
Cla005598 Citrullus lanatus Cla005598 I 0.737
TRIUR3_11082 Triticum urartu TRIUR3_11082 I 0.737
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.737
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N 0.737
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.737
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N 0.737
MLOC_5148 Hordeum vulgare MLOC_5148 I 0.737
Eucgr.F04424 Eucalyptus grandis Eucgr.F04424 I 0.737
VIT_13s0019g03820 Vitis vinifera VIT_13s0019g03820 N 0.737
LjSGA_079580.1.1 Lotus japonicus LjSGA_079580.1.1 I 0.731
cassava4159.m1 Manihot esculenta cassava4159.m1 N 0.731
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.727
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.727
PK11564.1 Cannabis sativa PK11564.1 I 0.727
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.727
evm.TU.supercontig_192.6 Carica papaya evm.TU.supercontig_192.6 I 0.727
Ca_13575 Cicer arietinum Ca_13575 I 0.727
F775_08326 Aegilops tauschii F775_08326 I 0.727
VIT_13s0019g03810 Vitis vinifera VIT_13s0019g03810 N 0.727
Traes_5BL_CE4CF3B5C Triticum aestivum Traes_5BL_CE4CF3B5C I 0.727
Sb05g000550 Sorghum bicolor Sb05g000550 I 0.727
Solyc06g082310.2 Solanum lycopersicum Solyc06g082310.2 I 0.727
Cucsa.358620 Cucumis sativus Cucsa.358620 N 0.727
PGSC0003DMG400030456 Solanum tuberosum PGSC0003DMG400030456 I 0.727
VIT_13s0019g03840 Vitis vinifera VIT_13s0019g03840 N 0.727
ONIVA05G01850 Oryza nivara ONIVA05G01850 I 0.727
mgf018189m Mimulus guttatus mgf018189m I 0.727
OS03G0659700 Oryza sativa OS03G0659700 I 0.723
orange1.1g038565m.g Citrus sinensis orange1.1g038565m.g I 0.720
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I 0.717
Lus10031769.g Linum usitatissimum Lus10031769.g I 0.717
TCM_032557 Theobroma cacao TCM_032557 I 0.717
SapurV1A.0284s0080 Salix purpurea SapurV1A.0284s0080 I 0.717
Gorai.002G104500 Gossypium raimondii Gorai.002G104500 I 0.717
LBD4 Vitis vinifera VIT_00s0125g00290 I 0.717
Gorai.011G290800 Gossypium raimondii Gorai.011G290800 I 0.717
SELMODRAFT_58936 Selaginella moellendorffii SELMODRAFT_58936 I 0.717
PRUPE_ppa012504mg Prunus persica PRUPE_ppa012504mg I 0.717
PRUPE_ppa012322mg Prunus persica PRUPE_ppa012322mg I 0.717
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I 0.717
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I 0.717
MDP0000284409 Malus domestica MDP0000284409 I 0.717
MDP0000268890 Malus domestica MDP0000268890 I 0.717
Lus10040638.g Linum usitatissimum Lus10040638.g I 0.717
MDP0000121203 Malus domestica MDP0000121203 I 0.717
gene20083-v1.0-hybrid Fragaria vesca gene20083-v1.0-hybrid I 0.717
SELMODRAFT_48883 Selaginella moellendorffii SELMODRAFT_48883 I 0.717
MTR_2g068760 Medicago truncatula MTR_2g068760 I 0.717
gene30046-v1.0-hybrid Fragaria vesca gene30046-v1.0-hybrid I 0.717
Cucsa.118370 Cucumis sativus Cucsa.118370 I 0.717
cassava20471.m1 Manihot esculenta cassava20471.m1 I 0.717
30169.m006340 Ricinus communis 30169.m006340 I 0.717
Cagra.1508s0061 Capsella grandiflora Cagra.1508s0061 I 0.717
VIT_13s0067g01880 Vitis vinifera VIT_13s0067g01880 I 0.717
Carubv10010462m.g Capsella rubella Carubv10010462m.g I 0.717
LBD4 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002773 I 0.717
cassava27818.m1 Manihot esculenta cassava27818.m1 I 0.717
GLYMA08G17990 Glycine max GLYMA08G17990 I 0.717
cassava30732.valid.m1 Manihot esculenta cassava30732.valid.m1 I 0.717
Bostr.15697s0446 Boechera stricta Bostr.15697s0446 I 0.717
Pm011040 Prunus mume Pm011040 I 0.717
Cla013678 Citrullus lanatus Cla013678 I 0.717
Thhalv10008917m.g Eutrema salsugineum Thhalv10008917m.g I 0.717
LBD3 Vitis vinifera VIT_19s0027g01120 I 0.717
LBD4 Arabidopsis thaliana AT1G31320 D 0.717
Eucgr.J00175 Eucalyptus grandis Eucgr.J00175 I 0.717
Aquca_118_00035 Aquilegia coerulea Aquca_118_00035 I 0.717
Eucgr.G03089 Eucalyptus grandis Eucgr.G03089 I 0.717
Cucsa.011680 Cucumis sativus Cucsa.011680 N 0.711
chr4.CM0229.130.nc Lotus japonicus chr4.CM0229.130.nc I 0.707
Bra014907 Brassica rapa Bra014907 I 0.707
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.707
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.707
Pavir.J06256 Panicum virgatum Pavir.J06256 I 0.707
GLYMA11G29450 Glycine max GLYMA11G29450 I 0.707
GSMUA_Achr10G14880_001 Musa acuminata GSMUA_Achr10G14880_001 I 0.707
GRMZM2G447176 Zea mays GRMZM2G447176 I 0.707
SapurV1A.0094s0480 Salix purpurea SapurV1A.0094s0480 I 0.707
SapurV1A.0673s0190 Salix purpurea SapurV1A.0673s0190 I 0.707
GSMUA_Achr10G13050_001 Musa acuminata GSMUA_Achr10G13050_001 I 0.707
GRMZM2G079185 Zea mays GRMZM2G079185 I 0.707
SapurV1A.0059s0540 Salix purpurea SapurV1A.0059s0540 I 0.707
PK24688.1 Cannabis sativa PK24688.1 I 0.707
Pavir.J18260 Panicum virgatum Pavir.J18260 I 0.707
GLYMA20G02850 Glycine max GLYMA20G02850 I 0.707
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.707
Pavir.J13923 Panicum virgatum Pavir.J13923 I 0.707
Si037583m.g Setaria italica Si037583m.g I 0.707
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I 0.707
cassava20865.m1 Manihot esculenta cassava20865.m1 I 0.707
29729.m002278 Ricinus communis 29729.m002278 I 0.707
Pm018982 Prunus mume Pm018982 I 0.707
VIT_13s0019g03780 Vitis vinifera VIT_13s0019g03780 N 0.707
Ca_06548 Cicer arietinum Ca_06548 I 0.707
cassava26200.m1 Manihot esculenta cassava26200.m1 I 0.707
Ciclev10029962m.g Citrus clementina Ciclev10029962m.g I 0.707
Aquca_030_00227 Aquilegia coerulea Aquca_030_00227 I 0.707
mgf022958m Mimulus guttatus mgf022958m I 0.707
Cucsa.275710 Cucumis sativus Cucsa.275710 N 0.707
Cucsa.236600 Cucumis sativus Cucsa.236600 I 0.707
Ciclev10016993m.g Citrus clementina Ciclev10016993m.g I 0.707
Gorai.009G149900 Gossypium raimondii Gorai.009G149900 I 0.707
Gorai.010G195100 Gossypium raimondii Gorai.010G195100 I 0.707
POPTR_0008s07280 Populus trichocarpa POPTR_0008s07280 I 0.707
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.707
orange1.1g031034m.g Citrus sinensis orange1.1g031034m.g I 0.707
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I 0.707
POPTR_0003s14880 Populus trichocarpa POPTR_0003s14880 I 0.707
POPTR_0007s08290 Populus trichocarpa POPTR_0007s08290 I 0.707
MDP0000155138 Malus domestica MDP0000155138 I 0.707
Si026864m.g Setaria italica Si026864m.g I 0.707
Gorai.011G051200 Gossypium raimondii Gorai.011G051200 I 0.707
TCM_042447 Theobroma cacao TCM_042447 I 0.707
TCM_029315 Theobroma cacao TCM_029315 I 0.707
Lus10018275.g Linum usitatissimum Lus10018275.g I 0.707
POPTR_0001s11610 Populus trichocarpa POPTR_0001s11610 I 0.707
mgf026046m Mimulus guttatus mgf026046m I 0.707
GRMZM2G025989 Zea mays GRMZM2G025989 I 0.702