MTR_4g060950 (Medicago truncatula)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 MTR_4g060950 T245449_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD4
M02261_2.00 		Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB		 PBM
Weirauch et al.(2014)
pTH7515 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES88690 LOB 24 123

Links

Other LOB family TFs
Other Medicago truncatula TFs

259 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_14605 Cicer arietinum Ca_14605 I 0.949
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.949
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.939
30111.m000703 Ricinus communis 30111.m000703 I 0.939
TCM_041094 Theobroma cacao TCM_041094 I 0.939
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.929
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.929
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.929
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.929
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.929
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.929
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.929
PK27389.1 Cannabis sativa PK27389.1 I 0.919
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.919
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.919
Pm000938 Prunus mume Pm000938 I 0.919
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.909
MDP0000319331 Malus domestica MDP0000319331 I 0.909
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.909
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.909
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.909
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.909
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.909
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.909
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.899
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.899
MDP0000218986 Malus domestica MDP0000218986 I 0.899
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.899
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.899
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.899
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.899
MDP0000318244 Malus domestica MDP0000318244 I 0.899
Ca_04287 Cicer arietinum Ca_04287 I 0.899
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.899
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.899
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.899
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.899
Cla000556 Citrullus lanatus Cla000556 I 0.899
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.889
TCM_043081 Theobroma cacao TCM_043081 I 0.889
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.889
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.889
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.889
mgf015666m Mimulus guttatus mgf015666m N 0.889
Bo01039s010 Brassica oleracea Bo01039s010 N 0.879
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.879
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.879
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N 0.879
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.879
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.879
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.879
PK23777.1 Cannabis sativa PK23777.1 I 0.879
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.879
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.879
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.879
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.879
LBD11 Arabidopsis thaliana AT2G28500 N 0.879
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.879
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.879
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.879
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.879
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.879
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.879
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.869
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.869
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.869
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.869
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.869
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.869
Bra035698 Brassica rapa Bra035698 N 0.869
Bra011942 Brassica rapa Bra011942 N 0.869
Bra000491 Brassica rapa Bra000491 N 0.869
Cla005134 Citrullus lanatus Cla005134 N 0.869
Cla020379 Citrullus lanatus Cla020379 I 0.869
Bo4g165420 Brassica oleracea Bo4g165420 N 0.869
Pm018585 Prunus mume Pm018585 I 0.869
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.869
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.859
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.859
Bo3g040220 Brassica oleracea Bo3g040220 N 0.859
Solyc06g075330.1 Solanum lycopersicum Solyc06g075330.1 N 0.852
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.848
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.848
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.848
MDP0000123013 Malus domestica MDP0000123013 I 0.848
MDP0000879799 Malus domestica MDP0000879799 N 0.848
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.848
MDP0000151784 Malus domestica MDP0000151784 I 0.848
Ca_02507 Cicer arietinum Ca_02507 N 0.848
mgf022524m Mimulus guttatus mgf022524m N 0.838
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.838
Bra018675 Brassica rapa Bra018675 N 0.838
OB05G11740 Oryza brachyantha OB05G11740 I 0.838
Bo5g008590 Brassica oleracea Bo5g008590 N 0.838
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.838
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.838
Gorai.012G185900 Gossypium raimondii Gorai.012G185900 N 0.830
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.828
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.828
MDP0000822986 Malus domestica MDP0000822986 I 0.828
mgf019622m Mimulus guttatus mgf019622m N 0.828
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.828
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.828
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.828
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.828
PK17019.1 Cannabis sativa PK17019.1 I 0.824
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.818
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.818
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.818
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.818
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.818
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.818
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.818
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.818
PDK_20s1376911g004 Phoenix dactylifera PDK_20s1376911g004 I 0.815
Eucgr.E02410 Eucalyptus grandis Eucgr.E02410 N 0.812
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.809
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.808
Bo8g112780 Brassica oleracea Bo8g112780 N 0.808
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.808
Si024430m.g Setaria italica Si024430m.g N 0.808
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.808
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.808
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.808
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.798
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.798
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.798
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.798
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.798
OB03G23270 Oryza brachyantha OB03G23270 N 0.798
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.798
Si037280m.g Setaria italica Si037280m.g N 0.798
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.798
Bra031599 Brassica rapa Bra031599 N 0.798
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.798
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.798
OS03G0287400 Oryza sativa OS03G0287400 N 0.798
OBART03G13260 Oryza barthii OBART03G13260 N 0.798
ORUFI05G01750 Oryza rufipogon ORUFI05G01750 I 0.789
BGIOSGA018905 Oryza indica BGIOSGA018905 I 0.789
OS05G0123000 Oryza sativa OS05G0123000 I 0.789
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.788
Cla005133 Citrullus lanatus Cla005133 N 0.788
OPUNC05G01610 Oryza punctata OPUNC05G01610 N 0.784
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N 0.778
F775_02335 Aegilops tauschii F775_02335 N 0.778
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.778
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.778
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N 0.778
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.778
OBART05G01640 Oryza barthii OBART05G01640 N 0.769
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.768
OPUNC05G01600 Oryza punctata OPUNC05G01600 N 0.763
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N 0.758
POPTR_0005s10050 Populus trichocarpa POPTR_0005s10050 I 0.750
OMERI05G01730 Oryza meridionalis OMERI05G01730 N 0.750
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.747
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.747
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N 0.737
Cucsa.207390 Cucumis sativus Cucsa.207390 N 0.737
VIT_13s0019g03800 Vitis vinifera VIT_13s0019g03800 N 0.736
PGSC0003DMG400030456 Solanum tuberosum PGSC0003DMG400030456 I 0.727
BRADI4G44850 Brachypodium distachyon BRADI4G44850 I 0.727
Solyc06g082310.2 Solanum lycopersicum Solyc06g082310.2 I 0.727
Eucgr.J00175 Eucalyptus grandis Eucgr.J00175 I 0.727
ONIVA05G01850 Oryza nivara ONIVA05G01850 I 0.727
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.727
VIT_13s0019g03760 Vitis vinifera VIT_13s0019g03760 N 0.727
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.727
orange1.1g038565m.g Citrus sinensis orange1.1g038565m.g I 0.720
chr6.CM0738.260.nd Lotus japonicus chr6.CM0738.260.nd I 0.717
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.717
MLOC_5148 Hordeum vulgare MLOC_5148 I 0.717
TRIUR3_11082 Triticum urartu TRIUR3_11082 I 0.717
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.717
Ca_13575 Cicer arietinum Ca_13575 I 0.717
Eucgr.G03089 Eucalyptus grandis Eucgr.G03089 I 0.717
GSMUA_Achr9G04330_001 Musa acuminata GSMUA_Achr9G04330_001 N 0.717
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.717
MTR_2g068760 Medicago truncatula MTR_2g068760 I 0.717
Gorai.010G195100 Gossypium raimondii Gorai.010G195100 I 0.717
PRUPE_ppa012504mg Prunus persica PRUPE_ppa012504mg I 0.717
SapurV1A.0284s0080 Salix purpurea SapurV1A.0284s0080 I 0.717
mgf022958m Mimulus guttatus mgf022958m I 0.717
cassava41200.m1 Manihot esculenta cassava41200.m1 N 0.717
mgf018189m Mimulus guttatus mgf018189m I 0.717
Cucsa.275710 Cucumis sativus Cucsa.275710 N 0.717
LjSGA_079580.1.1 Lotus japonicus LjSGA_079580.1.1 I 0.712
cassava4159.m1 Manihot esculenta cassava4159.m1 N 0.712
SapurV1A.0673s0190 Salix purpurea SapurV1A.0673s0190 I 0.707
Thhalv10008917m.g Eutrema salsugineum Thhalv10008917m.g I 0.707
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I 0.707
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.707
gene30046-v1.0-hybrid Fragaria vesca gene30046-v1.0-hybrid I 0.707
Gorai.002G104500 Gossypium raimondii Gorai.002G104500 I 0.707
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.707
MDP0000284409 Malus domestica MDP0000284409 I 0.707
MDP0000155138 Malus domestica MDP0000155138 I 0.707
MDP0000121203 Malus domestica MDP0000121203 I 0.707
PK11564.1 Cannabis sativa PK11564.1 I 0.707
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.707
MDP0000268890 Malus domestica MDP0000268890 I 0.707
VIT_13s0067g01880 Vitis vinifera VIT_13s0067g01880 I 0.707
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I 0.707
PRUPE_ppa012322mg Prunus persica PRUPE_ppa012322mg I 0.707
POPTR_0008s07280 Populus trichocarpa POPTR_0008s07280 I 0.707
POPTR_0007s08290 Populus trichocarpa POPTR_0007s08290 I 0.707
MTR_3g071590 Medicago truncatula MTR_3g071590 I 0.707
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I 0.707
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.707
Si037583m.g Setaria italica Si037583m.g I 0.707
Traes_5BL_CE4CF3B5C Triticum aestivum Traes_5BL_CE4CF3B5C I 0.707
VIT_13s0019g03780 Vitis vinifera VIT_13s0019g03780 N 0.707
TCM_042447 Theobroma cacao TCM_042447 I 0.707
TCM_032557 Theobroma cacao TCM_032557 I 0.707
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I 0.707
GRMZM2G447176 Zea mays GRMZM2G447176 I 0.707
GRMZM2G079185 Zea mays GRMZM2G079185 I 0.707
Bo4g170770 Brassica oleracea Bo4g170770 I 0.707
Bra018335 Brassica rapa Bra018335 I 0.707
Bo4g059700 Brassica oleracea Bo4g059700 I 0.707
LBD12 Arabidopsis thaliana AT2G30130 I 0.707
LBD4 Arabidopsis thaliana AT1G31320 D 0.707
Bra021612 Brassica rapa Bra021612 I 0.707
F775_08326 Aegilops tauschii F775_08326 I 0.707
GLYMA08G17990 Glycine max GLYMA08G17990 I 0.707
GLYMA14G06140 Glycine max GLYMA14G06140 I 0.707
GLYMA02G43030 Glycine max GLYMA02G43030 I 0.707
ASL5 Arabidopsis lyrata fgenesh2_kg.4__983__AT2G30130.1 I 0.707
LBD4 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002773 I 0.707
VIT_13s0019g03810 Vitis vinifera VIT_13s0019g03810 N 0.707
VIT_13s0019g03820 Vitis vinifera VIT_13s0019g03820 N 0.707
Bostr.15697s0446 Boechera stricta Bostr.15697s0446 I 0.707
Cagra.1508s0061 Capsella grandiflora Cagra.1508s0061 I 0.707
Aquca_118_00035 Aquilegia coerulea Aquca_118_00035 I 0.707
Aquca_030_00227 Aquilegia coerulea Aquca_030_00227 I 0.707
Cucsa.239660 Cucumis sativus Cucsa.239660 I 0.707
Carubv10010462m.g Capsella rubella Carubv10010462m.g I 0.707
Carubv10025543m.g Capsella rubella Carubv10025543m.g I 0.707
evm.TU.supercontig_192.6 Carica papaya evm.TU.supercontig_192.6 I 0.707
gene20083-v1.0-hybrid Fragaria vesca gene20083-v1.0-hybrid I 0.707
Eucgr.F04424 Eucalyptus grandis Eucgr.F04424 I 0.707
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I 0.707
Ciclev10029962m.g Citrus clementina Ciclev10029962m.g I 0.707
Cucsa.144430 Cucumis sativus Cucsa.144430 I 0.707
Cucsa.118370 Cucumis sativus Cucsa.118370 I 0.707
Pm011040 Prunus mume Pm011040 I 0.707
Pm018982 Prunus mume Pm018982 I 0.707
Cla013678 Citrullus lanatus Cla013678 I 0.707
Cla007354 Citrullus lanatus Cla007354 I 0.707
LBD3 Vitis vinifera VIT_19s0027g01120 I 0.707
29729.m002278 Ricinus communis 29729.m002278 I 0.707
30169.m006340 Ricinus communis 30169.m006340 I 0.707
cassava27818.m1 Manihot esculenta cassava27818.m1 I 0.707
cassava30732.valid.m1 Manihot esculenta cassava30732.valid.m1 I 0.707
cassava26200.m1 Manihot esculenta cassava26200.m1 I 0.707
cassava20865.m1 Manihot esculenta cassava20865.m1 I 0.707
cassava20471.m1 Manihot esculenta cassava20471.m1 I 0.707
gene21039-v1.0-hybrid Fragaria vesca gene21039-v1.0-hybrid I 0.707