Cucsa.275710 (Cucumis sativus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Cucsa.275710 T246522_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.275710.1 LOB 15 113

Links

Other LOB family TFs
Other Cucumis sativus TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.778
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.778
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.778
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.768
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.768
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.768
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.758
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.758
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.758
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.758
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.758
30111.m000703 Ricinus communis 30111.m000703 I 0.758
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.758
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.758
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.758
Ca_04287 Cicer arietinum Ca_04287 I 0.758
TCM_041094 Theobroma cacao TCM_041094 I 0.758
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.758
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.758
PK27389.1 Cannabis sativa PK27389.1 I 0.758
PK23777.1 Cannabis sativa PK23777.1 I 0.758
Cla004801 Citrullus lanatus Cla004801 N 0.750
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.747
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.747
Cla000556 Citrullus lanatus Cla000556 I 0.747
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.747
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.747
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.747
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.747
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.747
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.747
mgf019622m Mimulus guttatus mgf019622m N 0.737
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.737
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.737
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.737
Ca_14605 Cicer arietinum Ca_14605 I 0.737
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.737
MDP0000123013 Malus domestica MDP0000123013 I 0.737
Pm000938 Prunus mume Pm000938 I 0.737
Cla020379 Citrullus lanatus Cla020379 I 0.737
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.737
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.737
MDP0000318244 Malus domestica MDP0000318244 I 0.737
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.737
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.737
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.737
OB05G11740 Oryza brachyantha OB05G11740 I 0.737
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.737
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.737
MDP0000151784 Malus domestica MDP0000151784 I 0.737
MDP0000218986 Malus domestica MDP0000218986 I 0.737
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.737
MDP0000822986 Malus domestica MDP0000822986 I 0.737
MDP0000319331 Malus domestica MDP0000319331 I 0.737
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.727
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.727
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.727
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.727
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.727
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.727
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.727
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.727
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.727
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.727
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.727
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.727
TCM_043081 Theobroma cacao TCM_043081 I 0.727
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.727
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.727
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.727
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.727
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.727
mgf015666m Mimulus guttatus mgf015666m N 0.727
Pm018585 Prunus mume Pm018585 I 0.717
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.717
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.717
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.717
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.717
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.717
Si024430m.g Setaria italica Si024430m.g N 0.717
Bra018675 Brassica rapa Bra018675 N 0.717
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.717
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.717
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N 0.717
Bo5g008590 Brassica oleracea Bo5g008590 N 0.717
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.717
GSMUA_Achr9G04330_001 Musa acuminata GSMUA_Achr9G04330_001 N 0.707
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.707
LBD11 Arabidopsis thaliana AT2G28500 N 0.707
Bo4g165420 Brassica oleracea Bo4g165420 N 0.707
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.707
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.707
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.707
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.707
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.707
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.707
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.707
mgf022524m Mimulus guttatus mgf022524m N 0.707
MDP0000879799 Malus domestica MDP0000879799 N 0.707
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.707
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.707
PRUPE_ppa012504mg Prunus persica PRUPE_ppa012504mg I 0.707