Solyc04g050010.1 (Solanum lycopersicum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Solyc04g050010.1 T246086_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc04g050010.1.1 LOB 13 111

Links

Other LOB family TFs
Other Solanum lycopersicum TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.970
orange1.1g047530m.g Citrus sinensis orange1.1g047530m.g I 0.915
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.909
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.899
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.889
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.889
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.879
Ca_04287 Cicer arietinum Ca_04287 I 0.879
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.869
mgf022524m Mimulus guttatus mgf022524m N 0.869
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.869
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.869
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.859
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.859
Cla020379 Citrullus lanatus Cla020379 I 0.859
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.859
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.859
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.848
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.848
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.848
PK23777.1 Cannabis sativa PK23777.1 I 0.848
Ca_14605 Cicer arietinum Ca_14605 I 0.848
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.848
Pm018585 Prunus mume Pm018585 I 0.848
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.848
TCM_043081 Theobroma cacao TCM_043081 I 0.848
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.848
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.838
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.838
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N 0.838
Bra035698 Brassica rapa Bra035698 N 0.838
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.838
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.838
TCM_041094 Theobroma cacao TCM_041094 I 0.838
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.838
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.838
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.838
MDP0000151784 Malus domestica MDP0000151784 I 0.838
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.838
PK27389.1 Cannabis sativa PK27389.1 I 0.838
MDP0000123013 Malus domestica MDP0000123013 I 0.838
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.838
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.838
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.838
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.838
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.838
30111.m000703 Ricinus communis 30111.m000703 I 0.838
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.828
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.828
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.828
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.828
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.828
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.828
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.828
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.828
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.828
Bra018675 Brassica rapa Bra018675 N 0.828
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.828
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.828
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.828
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.828
Bo01039s010 Brassica oleracea Bo01039s010 N 0.828
mgf019622m Mimulus guttatus mgf019622m N 0.828
Bo5g008590 Brassica oleracea Bo5g008590 N 0.828
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.818
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.818
Pm000938 Prunus mume Pm000938 I 0.818
Cla005134 Citrullus lanatus Cla005134 N 0.818
Bra011942 Brassica rapa Bra011942 N 0.818
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.818
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.818
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.818
MDP0000822986 Malus domestica MDP0000822986 I 0.818
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.818
LBD11 Arabidopsis thaliana AT2G28500 N 0.818
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.818
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.818
MDP0000319331 Malus domestica MDP0000319331 I 0.818
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.818
Bo4g165420 Brassica oleracea Bo4g165420 N 0.818
Cla000556 Citrullus lanatus Cla000556 I 0.808
MDP0000218986 Malus domestica MDP0000218986 I 0.808
mgf015666m Mimulus guttatus mgf015666m N 0.808
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.808
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.808
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.808
MDP0000879799 Malus domestica MDP0000879799 N 0.808
Bo8g112780 Brassica oleracea Bo8g112780 N 0.808
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.808
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.808
MDP0000318244 Malus domestica MDP0000318244 I 0.808
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.808
OMERI05G01740 Oryza meridionalis OMERI05G01740 N 0.804
OPUNC05G01610 Oryza punctata OPUNC05G01610 N 0.804
Bra031599 Brassica rapa Bra031599 N 0.798
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.798
OB05G11740 Oryza brachyantha OB05G11740 I 0.798
Bra000491 Brassica rapa Bra000491 N 0.798
Bo3g040220 Brassica oleracea Bo3g040220 N 0.798
evm.TU.contig_40341.1 Carica papaya evm.TU.contig_40341.1 I 0.795
PGSC0003DMG400027372 Solanum tuberosum PGSC0003DMG400027372 I 0.795
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.788
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.788
Ca_02507 Cicer arietinum Ca_02507 N 0.788
OBART05G01640 Oryza barthii OBART05G01640 N 0.788
Cla005133 Citrullus lanatus Cla005133 N 0.788
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.788
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.787
ONIVA05G01850 Oryza nivara ONIVA05G01850 I 0.782
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.778
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.778
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.778
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.778
Gorai.012G185900 Gossypium raimondii Gorai.012G185900 N 0.774
PDK_20s1595351g001 Phoenix dactylifera PDK_20s1595351g001 N 0.769
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.768
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.768
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.768
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.768
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.768
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.768
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.768
Eucgr.E02410 Eucalyptus grandis Eucgr.E02410 N 0.762
evm.TU.contig_40341.2 Carica papaya evm.TU.contig_40341.2 N 0.761
VIT_13s0019g03800 Vitis vinifera VIT_13s0019g03800 N 0.759
LjSGA_079940.1 Lotus japonicus LjSGA_079940.1 N 0.750
Cucsa.358620 Cucumis sativus Cucsa.358620 N 0.750
Solyc06g075330.1 Solanum lycopersicum Solyc06g075330.1 N 0.750
OGLUM05G01700 Oryza glumaepatula OGLUM05G01700 N 0.747
Si024430m.g Setaria italica Si024430m.g N 0.747
Cucsa.207390 Cucumis sativus Cucsa.207390 N 0.747
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.747
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.747
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.747
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.747
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.747
PDK_20s1376911g004 Phoenix dactylifera PDK_20s1376911g004 I 0.741
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.737
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.737
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.737
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.737
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.737
PK17019.1 Cannabis sativa PK17019.1 I 0.735
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.727
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.727
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.727
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.727
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.727
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.727
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.727
OS03G0287400 Oryza sativa OS03G0287400 N 0.727
OBART03G13260 Oryza barthii OBART03G13260 N 0.727
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.727
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.727
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N 0.727
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.727
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.717
F775_02335 Aegilops tauschii F775_02335 N 0.717
Si037280m.g Setaria italica Si037280m.g N 0.717
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N 0.717
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.717
OB03G23270 Oryza brachyantha OB03G23270 N 0.717
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.717
Cucsa.011680 Cucumis sativus Cucsa.011680 N 0.711
VIT_13s0019g03810 Vitis vinifera VIT_13s0019g03810 N 0.707
ORUFI05G01750 Oryza rufipogon ORUFI05G01750 I 0.702
OS05G0123000 Oryza sativa OS05G0123000 I 0.702
BGIOSGA018905 Oryza indica BGIOSGA018905 I 0.702