CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf010035m
(
Mimulus guttatus
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
mgf010035m
T007351_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q7Y1W2_TOBAC
M09735_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CEF1_01
0.798
0.918
RAP2-12
M01046_2.00
Arabidopsis thaliana
RSMGBMNNNN
NNNNKVCKSY
PBM
Sullivan et al.(2014)
pTH7359
0.793
0.878
RAP2-12
M06588_2.00
Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN
NDNNNDHDDYGGCGGCGGHDN
Dap-seq
OMalley et al.(2016)
RAP212_col_a
0.793
0.878
EREBP1
M09708_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EREBP1_01
0.782
0.878
RAP2-2
M00719_2.00
Arabidopsis thaliana
NNRBYGNN
NNCRVYNN
PBM
Chang et al.(2013)
pTH7227
0.770
0.837
HRE1
M06595_2.00
Arabidopsis thaliana
NHNBMDCCGCCGCCRYHDHHN
NDDHDRYGGCGGCGGHKVNDN
Dap-seq
OMalley et al.(2016)
ERF73_col_a
0.755
0.837
HRE1
M06596_2.00
Arabidopsis thaliana
HNYHDMHNYCDCCGCCGCCRY
RYGGCGGCGGHGRNDKHDRND
Dap-seq
OMalley et al.(2016)
ERF73_colamp_a
0.755
0.837
Q2TN80_WHEAT
M09715_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_02
0.750
0.816
ERF2_TOBAC
M09727_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF2_01
0.723
0.735
CRF2
M01622_2.00
Arabidopsis thaliana
SCGCCGCC
GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8680
0.719
0.673
RAP2-3
M01050_2.00
Arabidopsis thaliana
CGCCGCCR
YGGCGGCG
PBM
Sullivan et al.(2014)
pTH8811
0.719
0.796
RAP2-3
M00847_2.00
Arabidopsis thaliana
NMGCCGCCDN
NHGGCGGCKN
PBM
Franco-Zorrilla et al.(2014)
RAP2.3
0.719
0.796
0100010458
M01644_2.00
Ostreococcus tauri
MGCCGSCR
YGSCGGCK
PBM
Weirauch et al.(2014)
pTH9447
0.719
0.714
O65242_TOBAC
M09730_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TSI1_01
0.713
0.633
ERF091
M06638_2.00
Arabidopsis thaliana
NNHNYHDCCGCCGCCRY
RYGGCGGCGGHDRNDNN
Dap-seq
OMalley et al.(2016)
AT4G18450_col_a
0.712
0.755
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN
NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.708
0.755
ERF9
M06670_2.00
Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF9_col_a
0.707
0.714
ERF9
M06671_2.00
Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN
Dap-seq
OMalley et al.(2016)
ERF9_colamp_a
0.707
0.714
ERF4
M01616_2.00
Arabidopsis thaliana
VCGCCGCC
GGCGGCGB
PBM
Weirauch et al.(2014)
pTH8156
0.702
0.714
ERF4
M06616_2.00
Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF4_col_a
0.702
0.714
ERF4
M06617_2.00
Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN
Dap-seq
OMalley et al.(2016)
ERF4_colamp_a
0.702
0.714
CRF3
M01633_2.00
Arabidopsis thaliana
NNGCCRNNN
NNNYGGCNN
PBM
Weirauch et al.(2014)
pTH8110
0.697
0.673
ERF5
M00721_2.00
Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN
PBM
Chang et al.(2013)
pTH7197
0.697
0.735
ERF5
M06674_2.00
Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR
Dap-seq
OMalley et al.(2016)
ERF5_col_a
0.697
0.735
ERF5
M06675_2.00
Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN
Dap-seq
OMalley et al.(2016)
ERF5_colamp_a
0.697
0.735
ERF5_TOBAC
M09729_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF4_02
0.694
0.694
ERF4_TOBAC
M09728_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_02
0.694
0.694
ERF113
M01629_2.00
Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN
PBM
Weirauch et al.(2014)
pTH8097
0.693
0.714
PK19363.1
M01100_2.00
Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN
PBM
Lambert et al.(2019)
pTH10138
0.688
0.673
PK19363.1
M01643_2.00
Cannabis sativa
CGCCGYCD
HGRCGGCG
PBM
Weirauch et al.(2014)
pTH9609
0.688
0.673
ERF1A
M00848_2.00
Arabidopsis thaliana
NNNNRNN
NNYNNNN
PBM
Franco-Zorrilla et al.(2014)
ATERF1
0.688
0.735
ERF1A
M00720_2.00
Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN
PBM
Chang et al.(2013)
pTH7202
0.688
0.735
ERF2
M01631_2.00
Arabidopsis thaliana
NNNGCCGNCN
NGNCGGCNNN
PBM
Weirauch et al.(2014)
pTH8113
0.688
0.735
ERF2
M06672_2.00
Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND
HNRYGGCGGCGRHDRNDDNDD
Dap-seq
OMalley et al.(2016)
ERF2_col_a
0.688
0.735
ERF2
M06673_2.00
Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR
YGGCGGCKSHDNNDNNNNNNN
Dap-seq
OMalley et al.(2016)
ERF2_colamp_a
0.688
0.735
PK02330.1
M01095_2.00
Cannabis sativa
NNNGCCGBCN
NGVCGGCNNN
PBM
Lambert et al.(2019)
pTH10093
0.687
0.694
AT2G33710
M01613_2.00
Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN
PBM
Weirauch et al.(2014)
pTH7543
0.686
0.714
AT2G33710
M06606_2.00
Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH
Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a
0.686
0.714
AT2G33710
M06607_2.00
Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN
Dap-seq
OMalley et al.(2016)
At2g33710_col
0.686
0.714
ERF10
M06562_2.00
Arabidopsis thaliana
NNHNNHNHHDYCGCCGCCRYN
NRYGGCGGCGRHDDNDNNDNN
Dap-seq
OMalley et al.(2016)
ERF10_col_a
0.683
0.714
ERF10
M06563_2.00
Arabidopsis thaliana
HDSCGCCGCCRHHDNNNNNN
NNNNNNHDDYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF10_colamp_a
0.683
0.714
CRF4
M01626_2.00
Arabidopsis thaliana
SCGCCGCC
GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8261
0.683
0.673
CRF4
M06645_2.00
Arabidopsis thaliana
BMDCCGCCGCCRCHDHHDCYN
NRGHDDHDGYGGCGGCGGHKV
Dap-seq
OMalley et al.(2016)
CRF4_col_a
0.683
0.673
CRF4
M06646_2.00
Arabidopsis thaliana
YCDYCGCCGCCGYYD
HRRCGGCGGCGRHGR
Dap-seq
OMalley et al.(2016)
CRF4_colamp_a
0.683
0.673
ERF6
M01621_2.00
Arabidopsis thaliana
NNGCCGGCVN
NBGCCGGCNN
PBM
Weirauch et al.(2014)
pTH7228
0.681
0.755
ERF6
M06637_2.00
Arabidopsis thaliana
NHNHHDCCGCCGCCRYHDHHN
NDDHDRYGGCGGCGGHDDNDN
Dap-seq
OMalley et al.(2016)
ERF6_col
0.681
0.755
A4F249_TOBAC
M09726_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF2_01
0.680
0.735
A4F248_TOBAC
M09725_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF1_01
0.678
0.735
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf010035m
AP2
119
170
NQYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFNTAEEAARAYDTEARRIRGS
Links
Other
AP2
family TFs
Other
Mimulus guttatus
TFs
1361 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29738.m001041
Ricinus communis
29738.m001041
I
30167.m000856
Ricinus communis
30167.m000856
I
Aquca_002_01093
Aquilegia coerulea
Aquca_002_01093
I
Aquca_026_00208
Aquilegia coerulea
Aquca_026_00208
I
TCP1
Arabidopsis thaliana
AT1G67260
D
BRC2
Arabidopsis thaliana
AT1G68800
I
Bo2g055640
Brassica oleracea
Bo2g055640
I
Bo2g061250
Brassica oleracea
Bo2g061250
I
Bo6g099040
Brassica oleracea
Bo6g099040
I
Bo6g103670
Brassica oleracea
Bo6g103670
I
Bostr.26959s0002
Boechera stricta
Bostr.26959s0002
I
Bostr.26959s0184
Boechera stricta
Bostr.26959s0184
I
Bra004097
Brassica rapa
Bra004097
I
Bra004212
Brassica rapa
Bra004212
I
Bra034010
Brassica rapa
Bra034010
I
Bra038350
Brassica rapa
Bra038350
I
BRADI3G36590
Brachypodium distachyon
BRADI3G36590
N
Cagra.1125s0016
Capsella grandiflora
Cagra.1125s0016
I
Cagra.1157s0001
Capsella grandiflora
Cagra.1157s0001
I
Carubv10020487m.g
Capsella rubella
Carubv10020487m.g
I
Carubv10020555m.g
Capsella rubella
Carubv10020555m.g
I
cassava10552.m1
Manihot esculenta
cassava10552.m1
I
cassava16230.m1
Manihot esculenta
cassava16230.m1
I
cassava32886.m1
Manihot esculenta
cassava32886.m1
I
chr1.LjB10L14.10.nc
Lotus japonicus
chr1.LjB10L14.10.nc
I
chr2.LjB17A04.40.nc
Lotus japonicus
chr2.LjB17A04.40.nc
I
chr5.CM0357.550.nc
Lotus japonicus
chr5.CM0357.550.nc
I
Ciclev10024246m.g
Citrus clementina
Ciclev10024246m.g
I
Ciclev10033382m.g
Citrus clementina
Ciclev10033382m.g
I
Cla002355
Citrullus lanatus
Cla002355
I
Cla007227
Citrullus lanatus
Cla007227
I
Cla016709
Citrullus lanatus
Cla016709
I
Cucsa.031600
Cucumis sativus
Cucsa.031600
I
Cucsa.238090
Cucumis sativus
Cucsa.238090
I
Cucsa.280880
Cucumis sativus
Cucsa.280880
I
Cucsa.283930
Cucumis sativus
Cucsa.283930
I
Eucgr.B00699
Eucalyptus grandis
Eucgr.B00699
I
Eucgr.J01466
Eucalyptus grandis
Eucgr.J01466
I
evm.TU.supercontig_1401.1
Carica papaya
evm.TU.supercontig_1401.1
I
evm.TU.supercontig_179.29
Carica papaya
evm.TU.supercontig_179.29
I
TCP1
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2001059
I
BRC2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2000933
I
gene03882-v1.0-hybrid
Fragaria vesca
gene03882-v1.0-hybrid
I
GLYMA05G07943
Glycine max
GLYMA05G07943
I
GLYMA08G28691
Glycine max
GLYMA08G28691
I
GLYMA10G39141
Glycine max
GLYMA10G39141
I
GLYMA13G07475
Glycine max
GLYMA13G07475
I
GLYMA18G51581
Glycine max
GLYMA18G51581
I
GLYMA19G05921
Glycine max
GLYMA19G05921
I
GLYMA20G28670
Glycine max
GLYMA20G28670
I
Gorai.001G200400
Gossypium raimondii
Gorai.001G200400
I
Gorai.008G186800
Gossypium raimondii
Gorai.008G186800
I
Lus10021713.g
Linum usitatissimum
Lus10021713.g
I
Lus10034072.g
Linum usitatissimum
Lus10034072.g
I
Lus10035055.g
Linum usitatissimum
Lus10035055.g
I
MDP0000173048
Malus domestica
MDP0000173048
I
MDP0000272980
Malus domestica
MDP0000272980
I
mgf019480m
Mimulus guttatus
mgf019480m
I
mgf022233m
Mimulus guttatus
mgf022233m
I
mgf026636m
Mimulus guttatus
mgf026636m
I
MTR_1g103380
Medicago truncatula
MTR_1g103380
I
MTR_6g017055
Medicago truncatula
MTR_6g017055
I
MTR_7g018500
Medicago truncatula
MTR_7g018500
I
orange1.1g035911m.g
Citrus sinensis
orange1.1g035911m.g
I
orange1.1g039323m.g
Citrus sinensis
orange1.1g039323m.g
I
PGSC0003DMG400000823
Solanum tuberosum
PGSC0003DMG400000823
I
PGSC0003DMG400003362
Solanum tuberosum
PGSC0003DMG400003362
I
PGSC0003DMG400005705
Solanum tuberosum
PGSC0003DMG400005705
I
PGSC0003DMG400007467
Solanum tuberosum
PGSC0003DMG400007467
I
PK12240.1
Cannabis sativa
PK12240.1
D
PK19717.1
Cannabis sativa
PK19717.1
D
Pm015499
Prunus mume
Pm015499
I
Pm029002
Prunus mume
Pm029002
I
POPTR_0008s11470
Populus trichocarpa
POPTR_0008s11470
I
POPTR_0010s14030
Populus trichocarpa
POPTR_0010s14030
I
POPTR_0017s13980
Populus trichocarpa
POPTR_0017s13980
I
PRUPE_ppa016240mg
Prunus persica
PRUPE_ppa016240mg
I
PRUPE_ppa027156mg
Prunus persica
PRUPE_ppa027156mg
I
SapurV1A.0304s0080
Salix purpurea
SapurV1A.0304s0080
I
SapurV1A.0682s0140
Salix purpurea
SapurV1A.0682s0140
I
Solyc03g119770.2
Solanum lycopersicum
Solyc03g119770.2
I
Solyc04g006980.1
Solanum lycopersicum
Solyc04g006980.1
I
Solyc05g009900.1
Solanum lycopersicum
Solyc05g009900.1
I
TCM_011874
Theobroma cacao
TCM_011874
I
TCM_019518
Theobroma cacao
TCM_019518
I
Thhalv10019499m.g
Eutrema salsugineum
Thhalv10019499m.g
I
BRC2
Vitis vinifera
VIT_01s0011g02920
I
TCP1
Vitis vinifera
VIT_14s0083g00150
I