TRIUR3_02710 (Triticum urartu)
AT hook

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02178 (AT_hook) IPR017956 TRIUR3_02710 T017849_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BRADI3G55950
M01673_2.00 		Brachypodium distachyon
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH9369 		0.991 1.000
OS02G0824300
M01688_2.00 		Oryza sativa
NNDWAWWN
NWWTWHNN		 PBM
Weirauch et al.(2014)
pTH8406 		0.991 1.000
AHL13
M01672_2.00 		Arabidopsis thaliana
NAWWTAWWWN
NWWWTAWWTN		 PBM
Weirauch et al.(2014)
pTH8202 		0.991 0.846
VIT_08s0007g04020
M01689_2.00 		Vitis vinifera
DBNDDDDDDN
NHHHHHHNVH		 PBM
Weirauch et al.(2014)
pTH9295 		0.991 0.808
TVAG_474020
M01106_2.00 		Trichomonas vaginalis
DNWWWAWW
WWTWWWNH		 PBM
Lambert et al.(2019)
pTH11493 		0.991 0.538
FGRRES_17512
M01105_2.00 		Fusarium graminearum
NNNDNWWWW
WWWWNHNNN		 PBM
Lambert et al.(2019)
pTH11412 		0.991 0.500
SUM1
M00008_2.00 		Saccharomyces cerevisiae
NNDWWWH
DWWWHNN		 PBM
Badis et al.(2008)
SUM1_2124 		0.991 0.462
SUM1
M07439_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0398.1 		0.991 0.462
SUM1
M08478_2.00 		Saccharomyces cerevisiae
RYGWCASWAAW
WTTWSTGWCRY		 Misc
DeBoer et al.(2011)
YDR310C_383 		0.991 0.462
SUM1
M08479_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 Misc
DeBoer et al.(2011)
YDR310C_478 		0.991 0.462
MTR_4g101990
M01687_2.00 		Medicago truncatula
AAAWTAAT
ATTAWTTT		 PBM
Weirauch et al.(2014)
pTH9209 		0.991 0.423
PK00377.1
M01107_2.00 		Cannabis sativa
DAWWWAWW
WWTWWWTH		 PBM
Lambert et al.(2019)
pTH11338 		0.991 0.423
Q7DLU9_PEA
M09772_2.00 		Pisum sativum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HMGIY_01 		0.991 0.423
HMGA1
M09769_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_01 		0.991 0.410
HMGA1
M09770_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_Q4 		0.991 0.410
ANIA_01690
M01675_2.00 		Aspergillus nidulans
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH8216 		0.991 0.405
ENSPPYG00000004736
M01685_2.00 		Pongo abelii
NNNNDWWW
WWWHNNNN		 PBM
Weirauch et al.(2014)
pTH9279 		0.991 0.395
Hmga2
M00751_2.00 		Mus musculus
NNNNRHWWNN
NNWWDYNNNN		 PBM
Weirauch et al.(2013)
pTH3046 		0.991 0.385
HMGA2
M09771_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGA2_01 		0.991 0.385
BRADI5G22430
M01674_2.00 		Brachypodium distachyon
VNRDDDHDD
HHDHHHYNB		 PBM
Weirauch et al.(2014)
pTH9242 		0.991 0.346
FGRRES_05233
M01104_2.00 		Fusarium graminearum
NNNDWWAWWH
DWWTWWHNNN		 PBM
Lambert et al.(2019)
pTH11377 		0.991 0.333
Setbp1
M01683_2.00 		Mus musculus
NDNNNNNNHN
NDNNNNNNHN		 PBM
Weirauch et al.(2014)
pTH1294 		0.991 0.308
Ahctf1
M00750_2.00 		Mus musculus
AAAWAWAW
ATWTWTTT		 PBM
Weirauch et al.(2013)
pTH2361 		0.991 0.308
Xrp1
M01686_2.00 		Drosophila melanogaster
NNNNDWAWW
WWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH9260 		0.991 0.308
PK26376.1
M01108_2.00 		Cannabis sativa
DDWWWAWW
WWTWWWHH		 PBM
Lambert et al.(2019)
pTH11261 		0.991 0.308
Xrp1
M05900_2.00 		Drosophila melanogaster
RTKRYGYAAT
ATTRCRYMAY		 B1H
Zhu et al.(2011)
Xrp1_CG6272_SANGER_5_FBgn0261113 		0.991 0.308
NCU05635
M01694_2.00 		Neurospora crassa
NNNWWWWNNN
NNNWWWWNNN		 PBM
Weirauch et al.(2014)
pTH8863 		0.991 0.289
ATEG_07399
M01676_2.00 		Aspergillus terreus
DHNNHNDWWW
WWWHNDNNDH		 PBM
Weirauch et al.(2014)
pTH9237 		0.991 0.269
ENSACAG00000014978
M01677_2.00 		Anolis carolinensis
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9222 		0.991 0.269
phf21ab
M01678_2.00 		Danio rerio
NNNDNADW
WHTNHNNN		 PBM
Weirauch et al.(2014)
pTH9254 		0.991 0.269
kmt2cb
M01679_2.00 		Danio rerio
WWAWAWAT
ATWTWTWW		 PBM
Weirauch et al.(2014)
pTH7876 		0.991 0.269
phf21ab
M01680_2.00 		Gasterosteus aculeatus
AAAAWAAA
TTTWTTTT		 PBM
Weirauch et al.(2014)
pTH9180 		0.991 0.269
PHF21A
M01681_2.00 		Meleagris gallopavo
HDNHNNDNHD
HDNHNNDNHD		 PBM
Weirauch et al.(2014)
pTH7875 		0.991 0.269
PHF21A
M01103_2.00 		Monodelphis domestica
NNNAWATWAATN
NATTWATWTNNN		 PBM
Lambert et al.(2019)
pTH9309 		0.991 0.269
PHF21A
M01682_2.00 		Monodelphis domestica
NNNNNHRH
DYDNNNNN		 PBM
Weirauch et al.(2014)
pTH9335 		0.991 0.269
Phf21a
M01684_2.00 		Mus musculus
NNNATATWAATN
NATTWATATNNN		 PBM
Weirauch et al.(2014)
pTH8550 		0.991 0.269
HMGA
M01671_2.00 		Arabidopsis thaliana
NNNNDWAWH
DWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH7395 		0.991 0.250
HMG-I Y
M02652_2.00 		Pisum sativum
NDWVAAANRVMRWMAY
RTKWYKBYNTTTBWHN		 SELEX
Mathelier et al.(2014)
MA0045.1 		0.991 0.250
estExt_fgeneshNG_pg.C_820014
M01692_2.00 		Naegleria gruberi
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9380 		0.991 0.231
NCU01145
M01693_2.00 		Neurospora crassa
RWATAWWTNN
NNAWWTATWY		 PBM
Weirauch et al.(2014)
pTH8916 		0.991 0.226
athp-3
M01691_2.00 		Caenorhabditis elegans
NNDDWDH
DHWHHNN		 PBM
Weirauch et al.(2014)
pTH9097 		0.991 0.210
hmg-12
M01690_2.00 		Caenorhabditis elegans
NNAWWTAWWTNN
NNAWWTAWWTNN		 PBM
Weirauch et al.(2014)
pTH8997 		0.991 0.148
SUM1
M01517_2.00 		Saccharomyces cerevisiae
NNNDWAWW
WWTWHNNN		 PBM
Zhu et al.(2009)
Sum1 		0.991 0.038
For this family, TFs with SR scores > 0.990 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRIUR3_02710-P1 AT hook 29 41
TRIUR3_02710-P1 AT hook 90 102

Links

Other AT hook family TFs
Other Triticum urartu TFs

1072 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29680.m001737 Ricinus communis 29680.m001737 I
29729.m002292 Ricinus communis 29729.m002292 I
30170.m014115 Ricinus communis 30170.m014115 I
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I
DREB2D Arabidopsis thaliana AT1G75490 D
DREB2G Arabidopsis thaliana AT5G18450 D
Bo2g016490 Brassica oleracea Bo2g016490 I
Bo2g083920 Brassica oleracea Bo2g083920 I
Bo3g013160 Brassica oleracea Bo3g013160 I
Bo6g086320 Brassica oleracea Bo6g086320 I
Bo6g119660 Brassica oleracea Bo6g119660 I
Bo9g155940 Brassica oleracea Bo9g155940 I
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I
Bra002159 Brassica rapa Bra002159 I
Bra003752 Brassica rapa Bra003752 I
Bra006460 Brassica rapa Bra006460 I
Bra008200 Brassica rapa Bra008200 I
Bra015840 Brassica rapa Bra015840 I
Bra023674 Brassica rapa Bra023674 I
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I
Carubv10002425m.g Capsella rubella Carubv10002425m.g I
Carubv10020960m.g Capsella rubella Carubv10020960m.g I
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I
cassava25887.m1 Manihot esculenta cassava25887.m1 I
cassava41240.m1 Manihot esculenta cassava41240.m1 I
Ca_10770 Cicer arietinum Ca_10770 I
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I
Cla006713 Citrullus lanatus Cla006713 I
Cla021113 Citrullus lanatus Cla021113 I
Cla022803 Citrullus lanatus Cla022803 I
Cucsa.136780 Cucumis sativus Cucsa.136780 I
Cucsa.231820 Cucumis sativus Cucsa.231820 I
Cucsa.342750 Cucumis sativus Cucsa.342750 I
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I
GLYMA04G03070 Glycine max GLYMA04G03070 I
GLYMA06G03110 Glycine max GLYMA06G03110 I
GLYMA14G07620 Glycine max GLYMA14G07620 I
GLYMA17G37350 Glycine max GLYMA17G37350 I
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I
GRMZM2G028386 Zea mays GRMZM2G028386 I
GRMZM2G156737 Zea mays GRMZM2G156737 I
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I
Lus10003581.g Linum usitatissimum Lus10003581.g I
Lus10006127.g Linum usitatissimum Lus10006127.g I
Lus10010632.g Linum usitatissimum Lus10010632.g I
Lus10012226.g Linum usitatissimum Lus10012226.g I
Lus10023633.g Linum usitatissimum Lus10023633.g I
Lus10024298.g Linum usitatissimum Lus10024298.g I
Lus10034902.g Linum usitatissimum Lus10034902.g I
MDP0000141335 Malus domestica MDP0000141335 I
MDP0000153866 Malus domestica MDP0000153866 I
MDP0000223609 Malus domestica MDP0000223609 I
MDP0000250924 Malus domestica MDP0000250924 I
MDP0000250927 Malus domestica MDP0000250927 I
MDP0000295902 Malus domestica MDP0000295902 I
mgf017629m Mimulus guttatus mgf017629m I
mgf024545m Mimulus guttatus mgf024545m I
MTR_1g023170 Medicago truncatula MTR_1g023170 I
MTR_3g112440 Medicago truncatula MTR_3g112440 I
MTR_5g083340 Medicago truncatula MTR_5g083340 I
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I
PGSC0003DMG400003706 Solanum tuberosum PGSC0003DMG400003706 I
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I
PK07402.1 Cannabis sativa PK07402.1 D
PK08602.1 Cannabis sativa PK08602.1 D
Pm003634 Prunus mume Pm003634 I
Pm006274 Prunus mume Pm006274 I
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I
Sb07g023575 Sorghum bicolor Sb07g023575 I
DREB2C Arabidopsis lyrata scaffold_402826.1 I
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I
Solyc04g080910.1 Solanum lycopersicum Solyc04g080910.1 I
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I
TCM_026121 Theobroma cacao TCM_026121 I
TCM_034132 Theobroma cacao TCM_034132 I
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I