OMERI09G03940 (Oryza meridionalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OMERI09G03940 T124918_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI09G03940.1 C2H2 ZF 278 299
OMERI09G03940.1 C2H2 ZF 298 324

Links

Other C2H2 ZF family TFs
Other Oryza meridionalis TFs

218 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27810.m000651 Ricinus communis 27810.m000651 N 0.772
29908.m006047 Ricinus communis 29908.m006047 N 0.000
30055.m001542 Ricinus communis 30055.m001542 N 0.761
30061.m000294 Ricinus communis 30061.m000294 N 0.000
30169.m006417 Ricinus communis 30169.m006417 N 0.781
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.772
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.805
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.761
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.761
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.782
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.761
WIP3 Arabidopsis thaliana AT1G08290 N 0.000
WIP6 Arabidopsis thaliana AT1G13290 N 0.788
WIP2 Arabidopsis thaliana AT3G57670 N 0.772
BGIOSGA023262 Oryza indica BGIOSGA023262 N 0.758
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.000
Bo4g111000 Brassica oleracea Bo4g111000 N 0.772
Bo5g008880 Brassica oleracea Bo5g008880 N 0.000
Bo5g015200 Brassica oleracea Bo5g015200 N 0.788
Bo5g081360 Brassica oleracea Bo5g081360 N 0.772
Bo6g073120 Brassica oleracea Bo6g073120 N 0.772
Bo8g092070 Brassica oleracea Bo8g092070 N 0.772
Bo8g112550 Brassica oleracea Bo8g112550 N 0.000
Bostr.1040s0072 Boechera stricta Bostr.1040s0072 N 0.000
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.788
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.772
Bostr.25219s0116 Boechera stricta Bostr.25219s0116 N 0.000
Bra003295 Brassica rapa Bra003295 N 0.772
Bra007346 Brassica rapa Bra007346 N 0.770
Bra014612 Brassica rapa Bra014612 N 0.772
Bra018638 Brassica rapa Bra018638 N 0.000
Bra019822 Brassica rapa Bra019822 N 0.788
Bra031621 Brassica rapa Bra031621 N 0.000
BRADI1G36067 Brachypodium distachyon BRADI1G36067 N 0.758
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.000
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.758
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.772
Cagra.0764s0003 Capsella grandiflora Cagra.0764s0003 N 0.000
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.788
Cagra.4395s0018 Capsella grandiflora Cagra.4395s0018 N 0.000
Carubv10009617m.g Capsella rubella Carubv10009617m.g N 0.000
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.788
Carubv10012266m.g Capsella rubella Carubv10012266m.g N 0.000
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.772
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.761
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.761
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.776
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.772
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.000
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.772
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.000
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.782
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.781
Ca_07051 Cicer arietinum Ca_07051 N 0.761
Ca_07269 Cicer arietinum Ca_07269 N 0.772
Ca_08435 Cicer arietinum Ca_08435 N 0.782
Ca_16482 Cicer arietinum Ca_16482 N 0.756
Ca_21713 Cicer arietinum Ca_21713 N 0.782
Ca_24699 Cicer arietinum Ca_24699 N 0.782
Ca_27078 Cicer arietinum Ca_27078 N 0.000
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.772
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.782
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.761
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.000
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.772
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.772
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.761
Cla000184 Citrullus lanatus Cla000184 N 0.000
Cla002714 Citrullus lanatus Cla002714 N 0.782
Cla008187 Citrullus lanatus Cla008187 N 0.772
Cla008675 Citrullus lanatus Cla008675 N 0.772
Cla015481 Citrullus lanatus Cla015481 N 0.000
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.000
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.000
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.000
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.772
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.782
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.772
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.772
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.805
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.761
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N 0.768
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.782
Eucgr.J01266 Eucalyptus grandis Eucgr.J01266 N 0.000
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.000
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.761
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.782
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.772
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.782
F775_14972 Aegilops tauschii F775_14972 N 0.758
WIP3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000684 N 0.000
TT1 Arabidopsis lyrata fgenesh2_kg.1__3606__AT1G34790.1 N 0.000
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.772
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.772
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.772
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.761
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.782
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.782
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.772
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.000
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.788
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.761
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.761
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.761
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.000
GLYMA13G01720 Glycine max GLYMA13G01720 N 0.000
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.000
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.761
GLYMA14G35140 Glycine max GLYMA14G35140 N 0.000
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.000
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.772
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.788
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.761
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.772
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.772
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.000
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.000
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.761
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.772
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.000
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.000
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.782
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.782
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.782
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.000
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.758
GRMZM2G435357 Zea mays GRMZM2G435357 N 0.758
GRMZM2G436344 Zea mays GRMZM2G436344 N 0.758
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.000
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.000
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.781
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.782
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.000
GSMUA_Achr6G03470_001 Musa acuminata GSMUA_Achr6G03470_001 N 0.781
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.000
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.772
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.772
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.782
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N 0.759
LPERR06G17470 Leersia perrieri LPERR06G17470 N 0.758
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.000
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.000
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.761
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.761
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.782
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.000
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.791
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.791
Lus10033454.g Linum usitatissimum Lus10033454.g N 0.000
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.782
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.000
MDP0000131949 Malus domestica MDP0000131949 N 0.761
MDP0000142494 Malus domestica MDP0000142494 N 0.000
MDP0000144266 Malus domestica MDP0000144266 N 0.000
MDP0000300013 Malus domestica MDP0000300013 N 0.761
MDP0000303483 Malus domestica MDP0000303483 N 0.782
MDP0000403797 Malus domestica MDP0000403797 N 0.772
MDP0000573922 Malus domestica MDP0000573922 N 0.000
MDP0000580545 Malus domestica MDP0000580545 N 0.772
MDP0000601705 Malus domestica MDP0000601705 N 0.772
mgf019910m Mimulus guttatus mgf019910m N 0.772
mgf022319m Mimulus guttatus mgf022319m N 0.772
mgf022981m Mimulus guttatus mgf022981m N 0.000
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.758
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.782
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.782
OB06G28740 Oryza brachyantha OB06G28740 N 0.758
OB08G26650 Oryza brachyantha OB08G26650 N 0.000
OBART06G20890 Oryza barthii OBART06G20890 N 0.782
OBART08G19670 Oryza barthii OBART08G19670 N 0.000
OGLUM06G22000 Oryza glumaepatula OGLUM06G22000 N 0.758
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.000
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.000
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.000
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.000
ONIVA06G24670 Oryza nivara ONIVA06G24670 N 0.758
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.000
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.000
OPUNC06G19020 Oryza punctata OPUNC06G19020 N 0.758
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.000
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.000
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.772
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.000
orange1.1g037234m.g Citrus sinensis orange1.1g037234m.g N 0.000
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.761
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.772
ORGLA06G0173600 Oryza glaberrima ORGLA06G0173600 N 0.758
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.000
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.000
ORUFI06G22350 Oryza rufipogon ORUFI06G22350 N 0.758
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.000
OS06G0612300 Oryza sativa OS06G0612300 N 0.758
OS08G0504000 Oryza sativa OS08G0504000 N 0.000
OS09G0485600 Oryza sativa OS09G0485600 N 0.000
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.758
Pavir.Db00765 Panicum virgatum Pavir.Db00765 N 0.758
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.000
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.000
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.000
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.761
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.772
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.772
PGSC0003DMG400030803 Solanum tuberosum PGSC0003DMG400030803 N 0.768
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.772
PK03705.1 Cannabis sativa PK03705.1 N 0.772
PK05257.1 Cannabis sativa PK05257.1 N 0.761
Pm000471 Prunus mume Pm000471 N 0.772
Pm001374 Prunus mume Pm001374 N 0.761
Pm025853 Prunus mume Pm025853 N 0.772
Pm029018 Prunus mume Pm029018 N 0.782
POPTR_0001s05630 Populus trichocarpa POPTR_0001s05630 N 0.000
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.000
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.000
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.781
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.761
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.000
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.761
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.782
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.772
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.772
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.782
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.761
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.772
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.781
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.772
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N 0.000
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.761
SapurV1A.0111s0170 Salix purpurea SapurV1A.0111s0170 N 0.000
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.761
SapurV1A.0445s0120 Salix purpurea SapurV1A.0445s0120 N 0.000
SapurV1A.0445s0140 Salix purpurea SapurV1A.0445s0140 N 0.000
SapurV1A.1001s0040 Salix purpurea SapurV1A.1001s0040 N 0.000
SapurV1A.2210s0020 Salix purpurea SapurV1A.2210s0020 N 0.000
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.758
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.000
Sb10g024040 Sorghum bicolor Sb10g024040 N 0.758
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.782
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.782
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.782
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.782
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.782
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.782
Si006616m.g Setaria italica Si006616m.g N 0.758
Si013819m.g Setaria italica Si013819m.g N 0.000
Si029897m.g Setaria italica Si029897m.g N 0.758
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.000
Solyc04g074320.1 Solanum lycopersicum Solyc04g074320.1 N 0.768
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.772
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.772
TCM_005892 Theobroma cacao TCM_005892 N 0.000
TCM_011858 Theobroma cacao TCM_011858 N 0.782
TCM_024788 Theobroma cacao TCM_024788 N 0.772
TCM_034881 Theobroma cacao TCM_034881 N 0.000
TCM_040610 Theobroma cacao TCM_040610 N 0.782
TCM_041441 Theobroma cacao TCM_041441 N 0.761
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.772
Thhalv10008125m.g Eutrema salsugineum Thhalv10008125m.g N 0.000
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.788
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.758
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.758
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.782
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.758
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.782
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.758
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.782
VIT_06s0004g01870 Vitis vinifera VIT_06s0004g01870 N 0.000
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.761
NTT Vitis vinifera VIT_08s0007g08070 N 0.772
TT1 Vitis vinifera VIT_18s0001g05860 N 0.000