CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLOCG00000012358
(
Lepisosteus oculatus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSLOCG00000012358
T035038_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Mxi1
M08754_2.00
Mus musculus
VCACGTGBSNBBNNV
BNNVVNSVCACGTGB
Misc
Kulakovskiy et al.(2013)
MXI1_MOUSE.H11MO.0.A
0.914
0.962
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000015223
bHLH
112
164
NRSTHNELEKNRRAHLRLCLERLKALIPLGPDCNRHTTLGLLNKAKAHIKKLE
ENSLOCP00000015228
bHLH
58
110
NRSTHNELEKNRRAHLRLCLERLKALIPLGPDCNRHTTLGLLNKAKAHIKKLE
Links
Other
bHLH
family TFs
Other
Lepisosteus oculatus
TFs
128 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.contig_43368
Carica papaya
evm.TU.contig_43368
I
0.000
gene22916-v1.0-hybrid
Fragaria vesca
gene22916-v1.0-hybrid
I
0.000
gene18029-v1.0-hybrid
Fragaria vesca
gene18029-v1.0-hybrid
I
0.000
evm.TU.supercontig_265.1
Carica papaya
evm.TU.supercontig_265.1
I
0.000
evm.TU.supercontig_185.2
Carica papaya
evm.TU.supercontig_185.2
I
0.000
evm.TU.supercontig_185.11
Carica papaya
evm.TU.supercontig_185.11
I
0.000
evm.TU.supercontig_1750.2
Carica papaya
evm.TU.supercontig_1750.2
I
0.000
evm.TU.supercontig_1750.1
Carica papaya
evm.TU.supercontig_1750.1
I
0.000
evm.TU.supercontig_1237.1
Carica papaya
evm.TU.supercontig_1237.1
I
0.000
gene22967-v1.0-hybrid
Fragaria vesca
gene22967-v1.0-hybrid
I
0.000
evm.TU.contig_40499.2
Carica papaya
evm.TU.contig_40499.2
I
0.000
evm.TU.contig_40485
Carica papaya
evm.TU.contig_40485
I
0.000
evm.TU.contig_38146
Carica papaya
evm.TU.contig_38146
I
0.000
evm.TU.contig_37084
Carica papaya
evm.TU.contig_37084
I
0.000
evm.TU.contig_35265
Carica papaya
evm.TU.contig_35265
I
0.000
evm.TU.contig_33457.2
Carica papaya
evm.TU.contig_33457.2
I
0.000
evm.TU.contig_27586
Carica papaya
evm.TU.contig_27586
I
0.000
SapurV1A.0066s0310
Salix purpurea
SapurV1A.0066s0310
I
0.000
LjT40B16.70.nc
Lotus japonicus
LjT40B16.70.nc
I
0.000
LjSGA_104570.1
Lotus japonicus
LjSGA_104570.1
I
0.000
LjSGA_102554.1
Lotus japonicus
LjSGA_102554.1
I
0.000
LjSGA_018236.1
Lotus japonicus
LjSGA_018236.1
I
0.000
chr6.LjT19B22.120.nd
Lotus japonicus
chr6.LjT19B22.120.nd
I
0.000
Thhalv10024119m.g
Eutrema salsugineum
Thhalv10024119m.g
I
0.000
Thhalv10023873m.g
Eutrema salsugineum
Thhalv10023873m.g
I
0.000
Thhalv10022373m.g
Eutrema salsugineum
Thhalv10022373m.g
I
0.000
evm.TU.contig_28448.4
Carica papaya
evm.TU.contig_28448.4
I
0.000
orange1.1g040642m.g
Citrus sinensis
orange1.1g040642m.g
I
0.000
MDP0000925348
Malus domestica
MDP0000925348
I
0.000
Lus10014578.g
Linum usitatissimum
Lus10014578.g
I
0.000
Gorai.013G210400
Gossypium raimondii
Gorai.013G210400
I
0.000
Gorai.013G210200
Gossypium raimondii
Gorai.013G210200
I
0.000
Gorai.004G292000
Gossypium raimondii
Gorai.004G292000
I
0.000
gene23924-v1.0-hybrid
Fragaria vesca
gene23924-v1.0-hybrid
I
0.000
Solyc01g102260.2
Solanum lycopersicum
Solyc01g102260.2
I
0.000
evm.TU.contig_26058.1
Carica papaya
evm.TU.contig_26058.1
I
0.000
Ca_08934
Cicer arietinum
Ca_08934
I
0.000
Ca_06495
Cicer arietinum
Ca_06495
I
0.000
VIT_14s0060g00300
Vitis vinifera
VIT_14s0060g00300
I
0.000
TCM_042799
Theobroma cacao
TCM_042799
I
0.000
TCM_026845
Theobroma cacao
TCM_026845
I
0.000
TCM_026842
Theobroma cacao
TCM_026842
I
0.000
TCM_025671
Theobroma cacao
TCM_025671
I
0.000
Ca_13275
Cicer arietinum
Ca_13275
I
0.000
PRUPE_ppa018168mg
Prunus persica
PRUPE_ppa018168mg
I
0.000
POPTR_0013s01880
Populus trichocarpa
POPTR_0013s01880
I
0.000
POPTR_0013s00350
Populus trichocarpa
POPTR_0013s00350
I
0.000
POPTR_0005s00420
Populus trichocarpa
POPTR_0005s00420
I
0.000
MTR_3g065100
Medicago truncatula
MTR_3g065100
I
0.000
GLYMA18G04760
Glycine max
GLYMA18G04760
I
0.000
GLYMA11G33460
Glycine max
GLYMA11G33460
I
0.000
Pm004396
Prunus mume
Pm004396
I
0.000
evm.TU.contig_25049.1
Carica papaya
evm.TU.contig_25049.1
I
0.000
Eucgr.E01737
Eucalyptus grandis
Eucgr.E01737
I
0.000
Ciclev10024463m.g
Citrus clementina
Ciclev10024463m.g
I
0.000
Ciclev10013728m.g
Citrus clementina
Ciclev10013728m.g
I
0.000
Ciclev10006519m.g
Citrus clementina
Ciclev10006519m.g
I
0.000
Bostr.2570s0082
Boechera stricta
Bostr.2570s0082
I
0.000
mgf026186m
Mimulus guttatus
mgf026186m
I
0.000
Cucsa.224270
Cucumis sativus
Cucsa.224270
I
0.000
Cucsa.050930
Cucumis sativus
Cucsa.050930
I
0.000
cassava19828.m1
Manihot esculenta
cassava19828.m1
I
0.000
30199.m000879
Ricinus communis
30199.m000879
I
0.000
30128.m008984
Ricinus communis
30128.m008984
I
0.000
Cla005226
Citrullus lanatus
Cla005226
I
0.000
cassava38612.m1
Manihot esculenta
cassava38612.m1
N
0.000
Gorai.013G210700
Gossypium raimondii
Gorai.013G210700
N
0.000
evm.TU.supercontig_22.66
Carica papaya
evm.TU.supercontig_22.66
N
0.000
MTR_3g466980
Medicago truncatula
MTR_3g466980
N
0.000
GLYMA11G30640
Glycine max
GLYMA11G30640
N
0.000