LjT01D09.100.nd (Lotus japonicus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 LjT01D09.100.nd T259407_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LjT01D09.100.nd MADS box 18 65

Links

Other MADS box family TFs
Other Lotus japonicus TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL62 Arabidopsis thaliana AT5G60440 I 0.708
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.763
MDP0000434703 Malus domestica MDP0000434703 I 0.708
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.729
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.750
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.750
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.750
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.729
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.750
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.729
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.750
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.708
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.729
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.771
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.729
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.750
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.771
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.729
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.708
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.771
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.771
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.771
evm.TU.contig_35697 Carica papaya evm.TU.contig_35697 N 0.750
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.708
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.750
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.750
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.729
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.729
LjSGA_120826.2 Lotus japonicus LjSGA_120826.2 N 0.979
LjSGA_082681.2 Lotus japonicus LjSGA_082681.2 N 0.979
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 1.000
LjSGA_020620.1 Lotus japonicus LjSGA_020620.1 N 0.750
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.750
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.750
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.729
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.750
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.771
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.708
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.708
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.729
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.729
MDP0000221590 Malus domestica MDP0000221590 N 0.729
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.729
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.750
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.729
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.708
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.750
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.729
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.750
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.750
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.708
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.708
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.729
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.729
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.708
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.708
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.708
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.708
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.708
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.708
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.708
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.708
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.729
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.750
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.708
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.729
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.729
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.708
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.708
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.708
Bo5g113750 Brassica oleracea Bo5g113750 N 0.729
Bo1g112460 Brassica oleracea Bo1g112460 N 0.708
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.750
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.729
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.729
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.729
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.750
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.729
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.750
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.750
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.729
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.729
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.729
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.729
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.708
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.771
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.729
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.729
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.708
30099.m001672 Ricinus communis 30099.m001672 N 0.750
Pm021071 Prunus mume Pm021071 N 0.729
Pm021018 Prunus mume Pm021018 N 0.729
Cla006571 Citrullus lanatus Cla006571 N 0.729
Ca_04665 Cicer arietinum Ca_04665 N 0.729
Ca_04661 Cicer arietinum Ca_04661 N 0.708
Ca_04660 Cicer arietinum Ca_04660 N 0.729
Ca_04659 Cicer arietinum Ca_04659 N 0.729
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.708