orange1.1g037179m.g (Citrus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 orange1.1g037179m.g T143275_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g037179m C2H2 ZF 193 214
orange1.1g037179m C2H2 ZF 213 239

Links

Other C2H2 ZF family TFs
Other Citrus sinensis TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27810.m000651 Ricinus communis 27810.m000651 N 0.778
29908.m006047 Ricinus communis 29908.m006047 N 0.821
30055.m001542 Ricinus communis 30055.m001542 N 0.788
30061.m000294 Ricinus communis 30061.m000294 N 0.814
30169.m006417 Ricinus communis 30169.m006417 N 0.768
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.778
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.764
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.764
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.764
BGIOSGA023262 Oryza indica BGIOSGA023262 N
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.774
Bo4g111000 Brassica oleracea Bo4g111000 N 0.778
Bo5g008880 Brassica oleracea Bo5g008880 N 0.782
Bo5g015200 Brassica oleracea Bo5g015200 N
Bo5g081360 Brassica oleracea Bo5g081360 N 0.778
Bo6g073120 Brassica oleracea Bo6g073120 N 0.778
Bo8g092070 Brassica oleracea Bo8g092070 N 0.778
Bo8g112550 Brassica oleracea Bo8g112550 N 0.782
Bostr.1040s0072 Boechera stricta Bostr.1040s0072 N 0.797
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.778
Bostr.25219s0116 Boechera stricta Bostr.25219s0116 N 0.773
Bra003295 Brassica rapa Bra003295 N 0.778
Bra007346 Brassica rapa Bra007346 N 0.776
Bra014612 Brassica rapa Bra014612 N 0.778
Bra018638 Brassica rapa Bra018638 N 0.782
Bra019822 Brassica rapa Bra019822 N
Bra031621 Brassica rapa Bra031621 N 0.782
BRADI1G36067 Brachypodium distachyon BRADI1G36067 N
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.774
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.768
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.778
Cagra.0764s0003 Capsella grandiflora Cagra.0764s0003 N 0.797
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N
Cagra.4395s0018 Capsella grandiflora Cagra.4395s0018 N 0.773
Carubv10009617m.g Capsella rubella Carubv10009617m.g N 0.773
Carubv10012013m.g Capsella rubella Carubv10012013m.g N
Carubv10012266m.g Capsella rubella Carubv10012266m.g N 0.791
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.778
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.788
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.788
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.763
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.778
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.808
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.778
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.821
cassava46219.m1 Manihot esculenta cassava46219.m1 N
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.768
Ca_07051 Cicer arietinum Ca_07051 N 0.764
Ca_07269 Cicer arietinum Ca_07269 N 0.778
Ca_08435 Cicer arietinum Ca_08435 N
Ca_16482 Cicer arietinum Ca_16482 N 0.783
Ca_21713 Cicer arietinum Ca_21713 N 0.768
Ca_24699 Cicer arietinum Ca_24699 N
Ca_27078 Cicer arietinum Ca_27078 N 0.797
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.778
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.782
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.827
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.778
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.778
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.788
Cla000184 Citrullus lanatus Cla000184 N 0.802
Cla002714 Citrullus lanatus Cla002714 N
Cla008187 Citrullus lanatus Cla008187 N 0.778
Cla008675 Citrullus lanatus Cla008675 N
Cla015481 Citrullus lanatus Cla015481 N 0.784
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.784
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.784
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.802
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.778
Cucsa.248320 Cucumis sativus Cucsa.248320 N
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.778
DOT5 Vitis vinifera VIT_01s0011g03100 N
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.778
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.788
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N 0.794
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.768
Eucgr.J01266 Eucalyptus grandis Eucgr.J01266 N 0.760
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.774
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.788
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.778
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.768
F775_14972 Aegilops tauschii F775_14972 N 0.768
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.778
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.778
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.788
GLYMA01G22120 Glycine max GLYMA01G22120 N
GLYMA02G10970 Glycine max GLYMA02G10970 N
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.778
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.808
GLYMA10G34770 Glycine max GLYMA10G34770 N
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.788
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.788
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.788
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.808
GLYMA13G01720 Glycine max GLYMA13G01720 N 0.797
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.808
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.788
GLYMA14G35140 Glycine max GLYMA14G35140 N 0.797
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.808
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.778
GLYMA20G32750 Glycine max GLYMA20G32750 N
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.788
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.778
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.778
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.784
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.784
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.788
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.778
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.784
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.827
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.768
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.768
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.774
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.768
GRMZM2G435357 Zea mays GRMZM2G435357 N
GRMZM2G436344 Zea mays GRMZM2G436344 N
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.774
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.768
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.768
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.798
GSMUA_Achr6G03470_001 Musa acuminata GSMUA_Achr6G03470_001 N
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.814
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.778
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.778
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.768
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N 0.803
LPERR06G17470 Leersia perrieri LPERR06G17470 N
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.774
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.774
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.764
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.764
Lus10021700.g Linum usitatissimum Lus10021700.g N
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.798
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.759
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.759
Lus10033454.g Linum usitatissimum Lus10033454.g N 0.803
Lus10035044.g Linum usitatissimum Lus10035044.g N
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.798
MDP0000131949 Malus domestica MDP0000131949 N 0.788
MDP0000142494 Malus domestica MDP0000142494 N 0.795
MDP0000144266 Malus domestica MDP0000144266 N 0.797
MDP0000300013 Malus domestica MDP0000300013 N 0.788
MDP0000303483 Malus domestica MDP0000303483 N
MDP0000403797 Malus domestica MDP0000403797 N 0.778
MDP0000573922 Malus domestica MDP0000573922 N 0.825
MDP0000580545 Malus domestica MDP0000580545 N 0.778
MDP0000601705 Malus domestica MDP0000601705 N 0.778
mgf019910m Mimulus guttatus mgf019910m N
mgf022319m Mimulus guttatus mgf022319m N 0.790
mgf022981m Mimulus guttatus mgf022981m N 0.784
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.768
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.768
MTR_1g093095 Medicago truncatula MTR_1g093095 N
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.778
NTT Vitis vinifera VIT_08s0007g08070 N 0.778
OB06G28740 Oryza brachyantha OB06G28740 N
OB08G26650 Oryza brachyantha OB08G26650 N 0.774
OBART06G20890 Oryza barthii OBART06G20890 N 0.768
OBART08G19670 Oryza barthii OBART08G19670 N 0.774
OGLUM06G22000 Oryza glumaepatula OGLUM06G22000 N
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.774
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.774
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.774
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.774
ONIVA06G24670 Oryza nivara ONIVA06G24670 N
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.774
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.774
OPUNC06G19020 Oryza punctata OPUNC06G19020 N
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.774
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.774
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.778
orange1.1g037234m.g Citrus sinensis orange1.1g037234m.g N 0.785
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.788
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.778
ORGLA06G0173600 Oryza glaberrima ORGLA06G0173600 N
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.774
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.774
ORUFI06G22350 Oryza rufipogon ORUFI06G22350 N
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.774
OS06G0612300 Oryza sativa OS06G0612300 N
OS08G0504000 Oryza sativa OS08G0504000 N 0.774
OS09G0485600 Oryza sativa OS09G0485600 N 0.774
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.768
Pavir.Db00765 Panicum virgatum Pavir.Db00765 N
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.774
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.774
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.798
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.764
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.778
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.778
PGSC0003DMG400030803 Solanum tuberosum PGSC0003DMG400030803 N 0.784
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N
PK03705.1 Cannabis sativa PK03705.1 N 0.778
PK05257.1 Cannabis sativa PK05257.1 N 0.758
Pm000471 Prunus mume Pm000471 N 0.778
Pm001374 Prunus mume Pm001374 N 0.788
Pm025853 Prunus mume Pm025853 N 0.778
Pm029018 Prunus mume Pm029018 N
POPTR_0001s05630 Populus trichocarpa POPTR_0001s05630 N
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.808
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.818
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.768
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.788
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.808
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.788
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.778
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.778
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.788
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.778
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.768
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.778
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N 0.788
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.788
SapurV1A.0111s0170 Salix purpurea SapurV1A.0111s0170 N
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.764
SapurV1A.0445s0120 Salix purpurea SapurV1A.0445s0120 N 0.773
SapurV1A.0445s0140 Salix purpurea SapurV1A.0445s0140 N 0.773
SapurV1A.1001s0040 Salix purpurea SapurV1A.1001s0040 N
SapurV1A.2210s0020 Salix purpurea SapurV1A.2210s0020 N
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.768
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.774
Sb10g024040 Sorghum bicolor Sb10g024040 N
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.768
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.768
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N
Si006616m.g Setaria italica Si006616m.g N
Si013819m.g Setaria italica Si013819m.g N 0.774
Si029897m.g Setaria italica Si029897m.g N 0.768
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.798
Solyc04g074320.1 Solanum lycopersicum Solyc04g074320.1 N 0.784
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.778
TCM_005892 Theobroma cacao TCM_005892 N 0.808
TCM_011858 Theobroma cacao TCM_011858 N
TCM_024788 Theobroma cacao TCM_024788 N 0.778
TCM_034881 Theobroma cacao TCM_034881 N 0.827
TCM_040610 Theobroma cacao TCM_040610 N 0.768
TCM_041441 Theobroma cacao TCM_041441 N 0.788
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.778
Thhalv10008125m.g Eutrema salsugineum Thhalv10008125m.g N 0.773
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.768
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.768
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.768
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.768
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.768
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.768
TT1 Arabidopsis lyrata fgenesh2_kg.1__3606__AT1G34790.1 N 0.797
TT1 Vitis vinifera VIT_18s0001g05860 N 0.821
VIT_06s0004g01870 Vitis vinifera VIT_06s0004g01870 N
WIP2 Arabidopsis thaliana AT3G57670 N 0.778
WIP3 Arabidopsis thaliana AT1G08290 N 0.773
WIP3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000684 N 0.773
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.788
WIP6 Arabidopsis thaliana AT1G13290 N