ORUFI08G17540 (Oryza rufipogon)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 ORUFI08G17540 T344215_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.830 0.418
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI08G17540.1 TCP 116 254

Links

Other TCP family TFs
Other Oryza rufipogon TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.983
OS08G0432300 Oryza sativa OS08G0432300 I 0.983
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.981
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.967
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.966
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.960
OBART08G15630 Oryza barthii OBART08G15630 N 0.954
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.948
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.928
Si033183m.g Setaria italica Si033183m.g I 0.927
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.927
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.923
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.921
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.920
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.918
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.918
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.917
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.916
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.916
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.916
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.916
OS09G0410500 Oryza sativa OS09G0410500 I 0.916
OBART09G10040 Oryza barthii OBART09G10040 I 0.916
F775_01923 Aegilops tauschii F775_01923 I 0.914
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.914
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.912
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.911
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.910
Si015230m.g Setaria italica Si015230m.g I 0.909
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.908
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.907
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.906
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.903
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.898
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.896
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.894
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.893
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.892
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.886
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.875
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.875
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.868
30174.m008721 Ricinus communis 30174.m008721 I 0.867
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.864
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.863
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.859
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.859
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.856
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.855
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.852
Lus10032465.g Linum usitatissimum Lus10032465.g N 0.851
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.840
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.840
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.838
TCM_012252 Theobroma cacao TCM_012252 I 0.837
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.837
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.833
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.833
Pm015499 Prunus mume Pm015499 I 0.833
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.832
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.832
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.830
TB1 Oryza sativa OS03G0706500 D 0.830
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.830
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.830
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.830
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.829
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.829
OBART03G31290 Oryza barthii OBART03G31290 I 0.828
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.828
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.826
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.826
Si038692m.g Setaria italica Si038692m.g I 0.826
30167.m000856 Ricinus communis 30167.m000856 I 0.826
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.825
Pm030202 Prunus mume Pm030202 I 0.825
Bra034010 Brassica rapa Bra034010 I 0.824
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.824
MDP0000224810 Malus domestica MDP0000224810 N 0.823
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.823
mgf024687m Mimulus guttatus mgf024687m I 0.823
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.822