GLYMA04G22407 (Glycine max)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GLYMA04G22407 T343855_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.866 0.382
TB1
M01312_2.00 		Oryza sativa
GGSCCCCCYM
KRGGGGGSCC		 PBM
Lambert et al.(2019)
pTH8740 		0.826 0.414
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA04G22407.1 TCP 124 275
GLYMA04G22407.2 TCP 124 275

Links

Other TCP family TFs
Other Glycine max TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.950
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.949
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.932
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.925
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.922
Pm030202 Prunus mume Pm030202 I 0.918
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.918
TCM_012252 Theobroma cacao TCM_012252 I 0.904
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.903
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.894
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.893
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.892
MDP0000224810 Malus domestica MDP0000224810 N 0.890
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.889
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.888
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.888
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.888
MDP0000219838 Malus domestica MDP0000219838 N 0.885
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.884
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.876
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.874
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.871
Cla019282 Citrullus lanatus Cla019282 N 0.871
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.870
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.867
Bra037579 Brassica rapa Bra037579 I 0.867
Bo1g117490 Brassica oleracea Bo1g117490 I 0.867
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.867
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.866
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.866
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.866
PK12240.1 Cannabis sativa PK12240.1 D 0.866
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.863
BRC1 Arabidopsis thaliana AT3G18550 I 0.861
Bra001710 Brassica rapa Bra001710 I 0.861
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.861
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.858
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.855
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.854
30167.m000856 Ricinus communis 30167.m000856 I 0.854
Bo3g071560 Brassica oleracea Bo3g071560 I 0.853
Bra004097 Brassica rapa Bra004097 I 0.853
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.853
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.853
mgf024687m Mimulus guttatus mgf024687m I 0.852
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.852
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.851
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.851
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.850
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.850
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.850
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.850
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.850
Cla018797 Citrullus lanatus Cla018797 N 0.850
Si033183m.g Setaria italica Si033183m.g I 0.848
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.848
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.846
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.846
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.845
MDP0000272980 Malus domestica MDP0000272980 I 0.845
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.844
BRC2 Arabidopsis thaliana AT1G68800 I 0.844
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.843
Pm015499 Prunus mume Pm015499 I 0.843
Si015230m.g Setaria italica Si015230m.g I 0.842
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.842
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.841
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.841
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.841
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.840
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.840
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.839
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.839
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.839
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.837
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.837
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.837
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.837
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.837
MDP0000173048 Malus domestica MDP0000173048 I 0.836
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.836
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.836
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.836
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.835
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.835
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.835
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.835
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.835
30174.m008721 Ricinus communis 30174.m008721 I 0.834
Bo5g117410 Brassica oleracea Bo5g117410 N 0.834
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.833
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.833
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.833
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.832
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.832
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.832
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.831
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.831
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.831
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.830
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.830
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.829
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.829
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.829
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.828
OBART09G10040 Oryza barthii OBART09G10040 I 0.828
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.828
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.828
OS09G0410500 Oryza sativa OS09G0410500 I 0.828
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.828
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.828
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.828
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.827
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.827
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.826
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.826
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.826
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.826
TB1 Oryza sativa OS03G0706500 D 0.826
OS08G0432300 Oryza sativa OS08G0432300 I 0.826
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.826
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.826
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.825
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.825
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.825
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.825
Bo6g103670 Brassica oleracea Bo6g103670 I 0.825
F775_01923 Aegilops tauschii F775_01923 I 0.823
TCM_011874 Theobroma cacao TCM_011874 I 0.822