TCM_011874 (Theobroma cacao)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 TCM_011874 T344437_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.907 0.474
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.869 0.429
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.847 0.403
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY02151 TCP 116 269

Links

Other TCP family TFs
Other Theobroma cacao TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.969
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.959
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.956
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.956
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.952
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.947
29738.m001041 Ricinus communis 29738.m001041 I 0.946
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.946
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.943
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.941
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.938
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.936
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.931
MDP0000173048 Malus domestica MDP0000173048 I 0.931
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.924
Pm029002 Prunus mume Pm029002 I 0.918
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.918
Cla002355 Citrullus lanatus Cla002355 I 0.917
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.916
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.914
BRC2 Arabidopsis thaliana AT1G68800 I 0.914
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.912
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.912
MDP0000272980 Malus domestica MDP0000272980 I 0.909
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.907
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.907
PK12240.1 Cannabis sativa PK12240.1 D 0.907
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.907
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.901
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.900
Cla007227 Citrullus lanatus Cla007227 I 0.899
Bo2g061250 Brassica oleracea Bo2g061250 I 0.899
Bra038350 Brassica rapa Bra038350 I 0.899
Cla016709 Citrullus lanatus Cla016709 I 0.899
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.894
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.894
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.893
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.893
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.893
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.892
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.891
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.888
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.888
mgf026636m Mimulus guttatus mgf026636m I 0.887
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.887
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.887
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.886
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.884
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.883
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.883
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.882
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.880
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.880
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.878
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.877
GLYMA08G28691 Glycine max GLYMA08G28691 I 0.877
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.877
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.876
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.876
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.876
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.874
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.874
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.873
mgf019480m Mimulus guttatus mgf019480m I 0.873
30167.m000856 Ricinus communis 30167.m000856 I 0.873
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.872
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.872
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.872
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.871
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.870
PK19717.1 Cannabis sativa PK19717.1 D 0.869
Bo6g103670 Brassica oleracea Bo6g103670 I 0.867
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.866
TCM_019518 Theobroma cacao TCM_019518 I 0.866
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.865
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.864
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.857
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.855
Cla019282 Citrullus lanatus Cla019282 N 0.852
Bra004212 Brassica rapa Bra004212 I 0.851
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.849
30174.m008721 Ricinus communis 30174.m008721 I 0.849
TCP1 Arabidopsis thaliana AT1G67260 D 0.847
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.847
GSMUA_Achr10G25520_001 Musa acuminata GSMUA_Achr10G25520_001 I 0.847
mgf022233m Mimulus guttatus mgf022233m I 0.845
Bo6g099040 Brassica oleracea Bo6g099040 I 0.845
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.843
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.843
MDP0000224810 Malus domestica MDP0000224810 N 0.843
Pm015499 Prunus mume Pm015499 I 0.843
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.840
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.839
Bra004097 Brassica rapa Bra004097 I 0.838
TCM_012252 Theobroma cacao TCM_012252 I 0.835
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.835
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.834
Bra034010 Brassica rapa Bra034010 I 0.834
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.832
Pm030202 Prunus mume Pm030202 I 0.832
Lus10034072.g Linum usitatissimum Lus10034072.g I 0.829
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.827
mgf024687m Mimulus guttatus mgf024687m I 0.827
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.825
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.824
Lus10003078.g Linum usitatissimum Lus10003078.g I 0.824
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.822