GLYMA10G39141 (Glycine max)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GLYMA10G39141 T343878_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.893 0.417
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.860 0.438
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.852 0.375
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA10G39141.1 TCP 106 249

Links

Other TCP family TFs
Other Glycine max TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.974
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.952
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.949
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.943
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.941
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.940
GLYMA08G28691 Glycine max GLYMA08G28691 I 0.940
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.939
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.939
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.939
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.920
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.916
mgf019480m Mimulus guttatus mgf019480m I 0.915
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.914
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.911
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.910
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.909
Cla007227 Citrullus lanatus Cla007227 I 0.906
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.905
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.903
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.899
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.899
BRC2 Arabidopsis thaliana AT1G68800 I 0.899
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.896
PK12240.1 Cannabis sativa PK12240.1 D 0.893
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.890
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.890
30167.m000856 Ricinus communis 30167.m000856 I 0.889
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.889
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.888
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.888
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.888
Bra004212 Brassica rapa Bra004212 I 0.887
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.886
mgf022233m Mimulus guttatus mgf022233m I 0.885
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.884
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.884
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.884
Cla002355 Citrullus lanatus Cla002355 I 0.884
TCM_019518 Theobroma cacao TCM_019518 I 0.883
MDP0000173048 Malus domestica MDP0000173048 I 0.881
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.880
Cla016709 Citrullus lanatus Cla016709 I 0.880
29738.m001041 Ricinus communis 29738.m001041 I 0.880
TCM_011874 Theobroma cacao TCM_011874 I 0.878
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.875
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.872
Pm029002 Prunus mume Pm029002 I 0.872
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.872
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.871
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.871
Bra004097 Brassica rapa Bra004097 I 0.870
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.870
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.869
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.869
Bra038350 Brassica rapa Bra038350 I 0.866
Bo2g061250 Brassica oleracea Bo2g061250 I 0.866
Bo6g103670 Brassica oleracea Bo6g103670 I 0.866
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.864
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.863
Bra034010 Brassica rapa Bra034010 I 0.861
PK19717.1 Cannabis sativa PK19717.1 D 0.860
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.860
Bo6g099040 Brassica oleracea Bo6g099040 I 0.859
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.854
MDP0000272980 Malus domestica MDP0000272980 I 0.852
TCP1 Arabidopsis thaliana AT1G67260 D 0.852
Bo2g055640 Brassica oleracea Bo2g055640 I 0.851
mgf026636m Mimulus guttatus mgf026636m I 0.849
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.847
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.844
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.844
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.841
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.835
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.831
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.831
Pm015499 Prunus mume Pm015499 I 0.829
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.829
Lus10003078.g Linum usitatissimum Lus10003078.g I 0.826
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.823
Lus10034072.g Linum usitatissimum Lus10034072.g I 0.822