Solyc03g119770.2 (Solanum lycopersicum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Solyc03g119770.2 T344409_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.845 0.437
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc03g119770.2.1 TCP 110 255

Links

Other TCP family TFs
Other Solanum lycopersicum TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.970
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.912
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.912
Cla002355 Citrullus lanatus Cla002355 I 0.889
TCM_011874 Theobroma cacao TCM_011874 I 0.886
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.885
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.882
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.882
MDP0000173048 Malus domestica MDP0000173048 I 0.881
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.881
MDP0000224810 Malus domestica MDP0000224810 N 0.880
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.879
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.878
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.878
30167.m000856 Ricinus communis 30167.m000856 I 0.876
Cla019282 Citrullus lanatus Cla019282 N 0.876
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.874
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.873
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.873
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.872
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.872
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.872
Cla016709 Citrullus lanatus Cla016709 I 0.872
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.870
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.870
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.868
BRC2 Arabidopsis thaliana AT1G68800 I 0.868
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.868
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.867
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.867
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.866
Pm029002 Prunus mume Pm029002 I 0.866
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.865
Pm030202 Prunus mume Pm030202 I 0.864
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.864
MDP0000272980 Malus domestica MDP0000272980 I 0.864
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.864
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.862
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.861
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.860
TCM_012252 Theobroma cacao TCM_012252 I 0.859
mgf024687m Mimulus guttatus mgf024687m I 0.859
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.859
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.859
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.858
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.858
29738.m001041 Ricinus communis 29738.m001041 I 0.858
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.857
Bra038350 Brassica rapa Bra038350 I 0.856
Bo2g061250 Brassica oleracea Bo2g061250 I 0.856
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.855
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.855
mgf019480m Mimulus guttatus mgf019480m I 0.854
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.853
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.852
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.851
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.851
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.851
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.851
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.850
MDP0000219838 Malus domestica MDP0000219838 N 0.850
TCM_019518 Theobroma cacao TCM_019518 I 0.850
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.850
Pm015499 Prunus mume Pm015499 I 0.849
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.849
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.848
mgf022233m Mimulus guttatus mgf022233m I 0.847
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.847
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.847
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.846
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.846
PK12240.1 Cannabis sativa PK12240.1 D 0.845
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.845
OBART09G10040 Oryza barthii OBART09G10040 I 0.844
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.844
OS09G0410500 Oryza sativa OS09G0410500 I 0.844
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.844
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.844
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.844
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.844
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.843
30174.m008721 Ricinus communis 30174.m008721 I 0.843
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.840
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.840
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.840
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.840
F775_01923 Aegilops tauschii F775_01923 I 0.839
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.838
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.838
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.837
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.837
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.837
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.835
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.835
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.835
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.834
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.834
Si015230m.g Setaria italica Si015230m.g I 0.832
Bra004097 Brassica rapa Bra004097 I 0.831
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.831
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.831
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.831
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.830
Bra004212 Brassica rapa Bra004212 I 0.829
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.829
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.828
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.828
Si033183m.g Setaria italica Si033183m.g I 0.828
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.827
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.827
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.827
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.826
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.826
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.824
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.823
Cla007227 Citrullus lanatus Cla007227 I 0.823
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.822