Cla019282 (Citrullus lanatus)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Cla019282 T344543_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla019282 TCP 92 245

Links

Other TCP family TFs
Other Citrullus lanatus TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.970
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.925
MDP0000224810 Malus domestica MDP0000224810 N 0.922
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.917
TCM_012252 Theobroma cacao TCM_012252 I 0.915
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.914
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.914
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.913
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.913
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.911
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.902
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.902
MDP0000219838 Malus domestica MDP0000219838 N 0.901
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.899
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.892
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.892
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.888
30174.m008721 Ricinus communis 30174.m008721 I 0.885
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.884
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.883
Bo5g117410 Brassica oleracea Bo5g117410 N 0.880
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.879
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.879
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.876
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.875
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.875
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.875
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.875
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.871
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.871
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.868
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.868
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.867
Pm030202 Prunus mume Pm030202 I 0.867
Bra001710 Brassica rapa Bra001710 I 0.866
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.865
BRC1 Arabidopsis thaliana AT3G18550 I 0.863
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.862
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.862
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.861
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.861
Bo3g071560 Brassica oleracea Bo3g071560 I 0.853
TCM_011874 Theobroma cacao TCM_011874 I 0.852
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.851
OBART09G10040 Oryza barthii OBART09G10040 I 0.851
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.851
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.851
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.851
OS09G0410500 Oryza sativa OS09G0410500 I 0.851
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.850
Bo1g117490 Brassica oleracea Bo1g117490 I 0.848
Bra037579 Brassica rapa Bra037579 I 0.848
Cla018797 Citrullus lanatus Cla018797 N 0.847
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.844
29738.m001041 Ricinus communis 29738.m001041 I 0.841
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.840
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.840
F775_01923 Aegilops tauschii F775_01923 I 0.840
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.840
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.839
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.838
Si015230m.g Setaria italica Si015230m.g I 0.838
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.833
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.832
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.832
Pm015499 Prunus mume Pm015499 I 0.832
Cla016709 Citrullus lanatus Cla016709 I 0.832
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.832
mgf024687m Mimulus guttatus mgf024687m I 0.832
Si033183m.g Setaria italica Si033183m.g I 0.831
MDP0000173048 Malus domestica MDP0000173048 I 0.830
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.830
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.829
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.829
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.829
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.828
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.828
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.828
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.828
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.828
Cla002355 Citrullus lanatus Cla002355 I 0.827
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.826
TCM_019518 Theobroma cacao TCM_019518 I 0.825
Si038692m.g Setaria italica Si038692m.g I 0.825
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.824
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.824
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.824
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.824
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.824
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.822
BRC2 Arabidopsis thaliana AT1G68800 I 0.822