BRC1 (Arabidopsis thaliana)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 AT3G18550 T343688_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.828 0.405
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G18550.1 TCP 146 308
AT3G18550.2 TCP 146 304
AT3G18550.3 TCP 146 308
AT3G18550.4 TCP 146 308

Links

Other TCP family TFs
Other Arabidopsis thaliana TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra001710 Brassica rapa Bra001710 I 0.976
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.976
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.975
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.975
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.974
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.973
Bo5g117410 Brassica oleracea Bo5g117410 N 0.970
Bo3g071560 Brassica oleracea Bo3g071560 I 0.967
Bra037579 Brassica rapa Bra037579 I 0.963
Bo1g117490 Brassica oleracea Bo1g117490 I 0.963
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.883
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.878
TCM_012252 Theobroma cacao TCM_012252 I 0.877
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.874
30174.m008721 Ricinus communis 30174.m008721 I 0.870
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.867
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.866
Cla019282 Citrullus lanatus Cla019282 N 0.863
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.863
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.861
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.860
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.859
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.853
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.852
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.852
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.852
MDP0000224810 Malus domestica MDP0000224810 N 0.851
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.850
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.849
F775_01923 Aegilops tauschii F775_01923 I 0.848
Cla018797 Citrullus lanatus Cla018797 N 0.848
Si015230m.g Setaria italica Si015230m.g I 0.845
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.842
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.842
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.839
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.837
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.835
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.835
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.834
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.834
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.834
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.834
MDP0000219838 Malus domestica MDP0000219838 N 0.833
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.833
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.832
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.831
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.830
OBART09G10040 Oryza barthii OBART09G10040 I 0.830
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.830
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.830
OS09G0410500 Oryza sativa OS09G0410500 I 0.830
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.830
OBART03G31290 Oryza barthii OBART03G31290 I 0.829
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.829
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.829
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.828
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.828
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.828
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.828
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.828
TB1 Oryza sativa OS03G0706500 D 0.828
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.827
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.827
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.826
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.826
Si038692m.g Setaria italica Si038692m.g I 0.826
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.825
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.824
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.824
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.824