evm.TU.supercontig_13.48 (Carica papaya)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 evm.TU.supercontig_13.48 T344811_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_13.48 TCP 149 296

Links

Other TCP family TFs
Other Carica papaya TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.915
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.912
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.911
TCM_012252 Theobroma cacao TCM_012252 I 0.910
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.906
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.904
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.903
Cla019282 Citrullus lanatus Cla019282 N 0.899
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.897
Bra001710 Brassica rapa Bra001710 I 0.892
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.892
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.891
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.890
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.889
Pm030202 Prunus mume Pm030202 I 0.889
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.889
Bo1g117490 Brassica oleracea Bo1g117490 I 0.889
Bra037579 Brassica rapa Bra037579 I 0.889
Bo3g071560 Brassica oleracea Bo3g071560 I 0.888
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.887
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.887
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.885
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.885
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.884
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.882
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.881
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.881
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.880
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.878
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.877
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.877
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.876
BRC1 Arabidopsis thaliana AT3G18550 I 0.874
MDP0000219838 Malus domestica MDP0000219838 N 0.872
30174.m008721 Ricinus communis 30174.m008721 I 0.872
MDP0000224810 Malus domestica MDP0000224810 N 0.869
Bo5g117410 Brassica oleracea Bo5g117410 N 0.864
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.861
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.861
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.850
29738.m001041 Ricinus communis 29738.m001041 I 0.849
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.844
TCM_019518 Theobroma cacao TCM_019518 I 0.842
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.840
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.839
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.839
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.837
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.837
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.836
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.836
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.836
Cla018797 Citrullus lanatus Cla018797 N 0.835
TCM_011874 Theobroma cacao TCM_011874 I 0.835
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.833
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.832
BRC2 Arabidopsis thaliana AT1G68800 I 0.831
MDP0000173048 Malus domestica MDP0000173048 I 0.831
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.829
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.828
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.828
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.827
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.827
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.826
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.826
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.826
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.824
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.824
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.824
Cla002355 Citrullus lanatus Cla002355 I 0.823
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.823
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.823
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.822