30174.m008721 (Ricinus communis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 30174.m008721 T344590_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.834 0.458
PK19717.1
M01318_2.00
Cannabis sativa
GGGSCCCMC

GKGGGSCCC
PBM
Lambert et al.(2019)
pTH10142
0.830 0.413
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS

SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.829 0.368
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30174.m008721 TCP 39 193

Links

Other TCP family TFs
Other Ricinus communis TFs

158 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.948
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.946
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.938
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.936
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.936
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.923
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.922
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.922
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.917
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.906
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.896
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.896
Lus10032465.g Linum usitatissimum Lus10032465.g N 0.889
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.888
Pm030202 Prunus mume Pm030202 I 0.888
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.888
MDP0000224810 Malus domestica MDP0000224810 N 0.886
TCM_012252 Theobroma cacao TCM_012252 I 0.885
Cla019282 Citrullus lanatus Cla019282 N 0.885
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.884
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.881
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.880
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.880
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.879
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.879
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.879
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.878
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.878
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.878
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.877
Pm015499 Prunus mume Pm015499 I 0.877
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.876
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.874
Si015230m.g Setaria italica Si015230m.g I 0.874
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.874
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.874
TCM_019518 Theobroma cacao TCM_019518 I 0.874
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.873
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.873
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.873
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.872
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.872
F775_01923 Aegilops tauschii F775_01923 I 0.872
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.872
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.871
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.870
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.870
BRC1 Arabidopsis thaliana AT3G18550 I 0.870
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.869
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.869
Cla002355 Citrullus lanatus Cla002355 I 0.868
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.868
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.868
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.868
mgf022233m Mimulus guttatus mgf022233m I 0.867
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.867
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.867
OS08G0432300 Oryza sativa OS08G0432300 I 0.867
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.867
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.867
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.866
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.866
29738.m001041 Ricinus communis 29738.m001041 I 0.865
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.865
mgf024687m Mimulus guttatus mgf024687m I 0.864
MDP0000173048 Malus domestica MDP0000173048 I 0.864
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.863
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.863
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.862
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.862
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.861
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.860
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.859
OBART09G10040 Oryza barthii OBART09G10040 I 0.859
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.859
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.859
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.859
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.859
MDP0000219838 Malus domestica MDP0000219838 N 0.859
OS09G0410500 Oryza sativa OS09G0410500 I 0.859
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.859
Cla016709 Citrullus lanatus Cla016709 I 0.857
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.857
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.857
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.857
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.857
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.856
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.855
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.855
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.854
MDP0000272980 Malus domestica MDP0000272980 I 0.853
OBART08G15630 Oryza barthii OBART08G15630 N 0.850
TCM_011874 Theobroma cacao TCM_011874 I 0.849
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.849
Si033183m.g Setaria italica Si033183m.g I 0.849
mgf026636m Mimulus guttatus mgf026636m I 0.848
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.848
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.847
Cla018797 Citrullus lanatus Cla018797 N 0.847
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.847
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.847
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.846
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.846
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.846
Pm029002 Prunus mume Pm029002 I 0.846
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.846
BRC2 Arabidopsis thaliana AT1G68800 I 0.846
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.845
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.844
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.844
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.843
Bra037579 Brassica rapa Bra037579 I 0.843
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.842
Bo5g117410 Brassica oleracea Bo5g117410 N 0.842
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.842
Bo2g055640 Brassica oleracea Bo2g055640 I 0.842
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.842
30167.m000856 Ricinus communis 30167.m000856 I 0.841
Bra001710 Brassica rapa Bra001710 I 0.840
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.840
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.839
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.838
Bo1g117490 Brassica oleracea Bo1g117490 I 0.838
Bo3g071560 Brassica oleracea Bo3g071560 I 0.838
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.837
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.836
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.835
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.835
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.834
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.834
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.834
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.834
TB1 Oryza sativa OS03G0706500 D 0.834
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.834
Bo2g061250 Brassica oleracea Bo2g061250 I 0.833
Bra038350 Brassica rapa Bra038350 I 0.833
Bra034010 Brassica rapa Bra034010 I 0.832
Bo6g103670 Brassica oleracea Bo6g103670 I 0.832
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.831
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.831
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.831
Cla007227 Citrullus lanatus Cla007227 I 0.831
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.831
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.830
PK19717.1 Cannabis sativa PK19717.1 D 0.830
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.830
PK12240.1 Cannabis sativa PK12240.1 D 0.829
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.829
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.828
Bo6g099040 Brassica oleracea Bo6g099040 I 0.827
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.827
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.826
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.826
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.826
OBART03G31290 Oryza barthii OBART03G31290 I 0.826
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.826
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.822
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.822