Eucgr.J01466 (Eucalyptus grandis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Eucgr.J01466 T344804_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.887 0.410
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.878 0.455
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.865 0.385
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.J01466.1 TCP 56 214

Links

Other TCP family TFs
Other Eucalyptus grandis TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30167.m000856 Ricinus communis 30167.m000856 I 0.925
TCM_019518 Theobroma cacao TCM_019518 I 0.906
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.903
Cla007227 Citrullus lanatus Cla007227 I 0.902
Bra004212 Brassica rapa Bra004212 I 0.900
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.900
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.899
Bo6g099040 Brassica oleracea Bo6g099040 I 0.898
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.898
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.898
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.897
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.897
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.896
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.896
Cla016709 Citrullus lanatus Cla016709 I 0.895
Pm015499 Prunus mume Pm015499 I 0.895
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.894
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.894
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.893
Bo6g103670 Brassica oleracea Bo6g103670 I 0.891
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.891
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.891
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.891
TCP1 Arabidopsis thaliana AT1G67260 D 0.887
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.885
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.885
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.883
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.880
BRC2 Arabidopsis thaliana AT1G68800 I 0.879
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.879
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.879
GLYMA08G28691 Glycine max GLYMA08G28691 I 0.879
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.879
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.878
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.878
PK19717.1 Cannabis sativa PK19717.1 D 0.878
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.877
MDP0000173048 Malus domestica MDP0000173048 I 0.877
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.876
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.876
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.875
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.874
Bra004097 Brassica rapa Bra004097 I 0.874
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.874
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.873
Bra034010 Brassica rapa Bra034010 I 0.873
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.872
Bo2g055640 Brassica oleracea Bo2g055640 I 0.869
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.868
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.868
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.868
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.867
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.867
PK12240.1 Cannabis sativa PK12240.1 D 0.865
TCM_011874 Theobroma cacao TCM_011874 I 0.865
Cla002355 Citrullus lanatus Cla002355 I 0.865
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.864
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.862
MDP0000272980 Malus domestica MDP0000272980 I 0.862
mgf019480m Mimulus guttatus mgf019480m I 0.861
Bo2g061250 Brassica oleracea Bo2g061250 I 0.861
Bra038350 Brassica rapa Bra038350 I 0.861
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.861
Pm029002 Prunus mume Pm029002 I 0.860
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.860
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.859
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.859
29738.m001041 Ricinus communis 29738.m001041 I 0.857
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.856
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.855
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.854
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.852
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.851
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.851
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.851
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.850
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.849
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.848
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.848
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.845
mgf022233m Mimulus guttatus mgf022233m I 0.845
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.843
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.843
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.843
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.839
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.838
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.838
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.836
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.835
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.834
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.834
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.831
30174.m008721 Ricinus communis 30174.m008721 I 0.829
Pm030202 Prunus mume Pm030202 I 0.828
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.828
mgf026636m Mimulus guttatus mgf026636m I 0.828
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.826
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.826
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.826
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.826
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.823