PGSC0003DMG400005705 (Solanum tuberosum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 PGSC0003DMG400005705 T344255_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.848 0.448
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400014571 TCP 1 126
PGSC0003DMT400014572 TCP 103 248
PGSC0003DMT400014573 TCP 103 248

Links

Other TCP family TFs
Other Solanum tuberosum TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.970
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.917
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.917
Traes_2BS_03909B330 Triticum aestivum Traes_2BS_03909B330 N 0.911
TCM_011874 Theobroma cacao TCM_011874 I 0.901
Traes_2DS_4C8E5F416 Triticum aestivum Traes_2DS_4C8E5F416 N 0.897
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.894
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.890
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.890
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.888
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.880
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.880
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.880
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.879
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.879
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.879
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.878
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.878
Cla002355 Citrullus lanatus Cla002355 I 0.877
MDP0000173048 Malus domestica MDP0000173048 I 0.877
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.877
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.876
MDP0000224810 Malus domestica MDP0000224810 N 0.876
Cla019282 Citrullus lanatus Cla019282 N 0.875
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.875
AC234521.1_FG006 Zea mays AC234521.1_FG006 N 0.873
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.872
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.872
30167.m000856 Ricinus communis 30167.m000856 I 0.872
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.871
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.870
BRC2 Arabidopsis thaliana AT1G68800 I 0.870
TCM_012252 Theobroma cacao TCM_012252 I 0.869
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.869
Pm030202 Prunus mume Pm030202 I 0.869
MDP0000272980 Malus domestica MDP0000272980 I 0.869
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.867
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.867
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.867
Cla016709 Citrullus lanatus Cla016709 I 0.866
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.865
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.864
Pm029002 Prunus mume Pm029002 I 0.864
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.863
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.863
mgf019480m Mimulus guttatus mgf019480m I 0.862
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.861
mgf024687m Mimulus guttatus mgf024687m I 0.859
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.859
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.857
GRMZM2G088440 Zea mays GRMZM2G088440 N 0.855
MDP0000219838 Malus domestica MDP0000219838 N 0.855
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.855
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.854
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.854
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.854
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.853
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.852
29738.m001041 Ricinus communis 29738.m001041 I 0.852
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.852
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.852
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.852
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.852
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.851
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.851
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.851
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.850
TCM_019518 Theobroma cacao TCM_019518 I 0.850
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.850
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.849
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.849
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.848
PK12240.1 Cannabis sativa PK12240.1 D 0.848
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.848
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.847
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.847
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.847
Pm015499 Prunus mume Pm015499 I 0.847
Si015230m.g Setaria italica Si015230m.g I 0.846
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.846
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.846
OB03G38320 Oryza brachyantha OB03G38320 I 0.845
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.845
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.844
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.844
OBART09G10040 Oryza barthii OBART09G10040 I 0.844
OS09G0410500 Oryza sativa OS09G0410500 I 0.844
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.844
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.844
Bo2g061250 Brassica oleracea Bo2g061250 I 0.844
30174.m008721 Ricinus communis 30174.m008721 I 0.844
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.844
Bra038350 Brassica rapa Bra038350 I 0.844
F775_01923 Aegilops tauschii F775_01923 I 0.844
GRMZM2G170232 Zea mays GRMZM2G170232 N 0.843
GRMZM2G359599 Zea mays GRMZM2G359599 N 0.843
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.842
mgf022233m Mimulus guttatus mgf022233m I 0.842
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.842
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.841
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.840
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.839
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.838
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.838
GRMZM2G135461 Zea mays GRMZM2G135461 N 0.838
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.837
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.836
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.836
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.835
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.834
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.834
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.833
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.832
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.831
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.831
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.831
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.830
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.830
Bra004097 Brassica rapa Bra004097 I 0.829
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.828
Bra034010 Brassica rapa Bra034010 I 0.828
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.827
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.826
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.826
Si033183m.g Setaria italica Si033183m.g I 0.824
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.824
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.824
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.823
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.823
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.823