Sb07g021140 (Sorghum bicolor)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Sb07g021140 T344353_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TB1
M01312_2.00 		Oryza sativa
GGSCCCCCYM
KRGGGGGSCC		 PBM
Lambert et al.(2019)
pTH8740 		0.852 0.522
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.828 0.478
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.825 0.478
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb07g021140.1 TCP 78 189

Links

Other TCP family TFs
Other Sorghum bicolor TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.970
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.968
Si015230m.g Setaria italica Si015230m.g I 0.968
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.958
OBART09G10040 Oryza barthii OBART09G10040 I 0.951
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.951
OS09G0410500 Oryza sativa OS09G0410500 I 0.951
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.950
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.949
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.949
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.949
Si033183m.g Setaria italica Si033183m.g I 0.948
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.946
F775_01923 Aegilops tauschii F775_01923 I 0.945
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.945
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.944
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.943
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.942
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.942
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.941
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.941
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.938
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.937
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.935
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.933
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.933
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.931
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.923
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.920
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.918
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.918
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.918
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.917
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.907
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.906
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.902
OS08G0432300 Oryza sativa OS08G0432300 I 0.896
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.896
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.896
GRMZM2G414114 Zea mays GRMZM2G414114 N 0.893
GRMZM2G458087 Zea mays GRMZM2G458087 N 0.893
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.893
30174.m008721 Ricinus communis 30174.m008721 I 0.880
OBART08G15630 Oryza barthii OBART08G15630 N 0.873
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.864
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.863
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.861
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.860
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.860
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.856
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.856
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.854
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.853
TCM_012252 Theobroma cacao TCM_012252 I 0.852
TB1 Oryza sativa OS03G0706500 D 0.852
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.852
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.852
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.852
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.852
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.851
TCM_019518 Theobroma cacao TCM_019518 I 0.850
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.849
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.848
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.848
Pm030202 Prunus mume Pm030202 I 0.848
Traes_2AS_1A307CE26 Triticum aestivum Traes_2AS_1A307CE26 N 0.846
Traes_2BS_03909B330 Triticum aestivum Traes_2BS_03909B330 N 0.846
mgf022233m Mimulus guttatus mgf022233m I 0.846
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.846
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.846
OBART03G31290 Oryza barthii OBART03G31290 I 0.846
GRMZM2G359599 Zea mays GRMZM2G359599 N 0.845
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.845
GRMZM2G135461 Zea mays GRMZM2G135461 N 0.844
Pm015499 Prunus mume Pm015499 I 0.844
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.844
Traes_2DS_4C8E5F416 Triticum aestivum Traes_2DS_4C8E5F416 N 0.843
AC234521.1_FG006 Zea mays AC234521.1_FG006 N 0.842
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.840
Cla019282 Citrullus lanatus Cla019282 N 0.839
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.839
Si038692m.g Setaria italica Si038692m.g I 0.837
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.836
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.836
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.835
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.835
GRMZM2G170232 Zea mays GRMZM2G170232 N 0.833
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.832
30167.m000856 Ricinus communis 30167.m000856 I 0.831
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.831
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.831
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.831
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.831
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.830
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.830
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.830
Bo3g071560 Brassica oleracea Bo3g071560 I 0.829
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.829
PK12240.1 Cannabis sativa PK12240.1 D 0.828
MDP0000224810 Malus domestica MDP0000224810 N 0.828
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.828
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.827
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.827
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.827
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.827
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.827
Bo5g117410 Brassica oleracea Bo5g117410 N 0.826
PK19717.1 Cannabis sativa PK19717.1 D 0.825
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.825
Lus10032465.g Linum usitatissimum Lus10032465.g N 0.824
Bo1g117490 Brassica oleracea Bo1g117490 I 0.824
Bra037579 Brassica rapa Bra037579 I 0.824
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.824
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.823
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.823
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.822
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.822