TCM_012252 (Theobroma cacao)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 TCM_012252 T344438_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.845 0.345
TB1
M01312_2.00 		Oryza sativa
GGSCCCCCYM
KRGGGGGSCC		 PBM
Lambert et al.(2019)
pTH8740 		0.833 0.385
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.823 0.412
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY20926 TCP 122 269
EOY20927 TCP 122 269

Links

Other TCP family TFs
Other Theobroma cacao TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.952
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.933
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.933
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.933
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.928
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.920
Cla019282 Citrullus lanatus Cla019282 N 0.915
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.910
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.910
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.904
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.902
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.899
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.899
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.896
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.896
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.895
MDP0000224810 Malus domestica MDP0000224810 N 0.894
mgf024687m Mimulus guttatus mgf024687m I 0.892
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.892
Pm030202 Prunus mume Pm030202 I 0.891
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.891
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.886
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.886
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.885
30174.m008721 Ricinus communis 30174.m008721 I 0.885
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.885
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.885
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.885
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.884
Bo1g117490 Brassica oleracea Bo1g117490 I 0.879
Bra037579 Brassica rapa Bra037579 I 0.879
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.879
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.878
Bo5g117410 Brassica oleracea Bo5g117410 N 0.878
BRC1 Arabidopsis thaliana AT3G18550 I 0.877
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.876
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.874
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.873
MDP0000219838 Malus domestica MDP0000219838 N 0.873
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.872
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.872
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.872
Bra001710 Brassica rapa Bra001710 I 0.870
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.869
BRC2 Arabidopsis thaliana AT1G68800 I 0.867
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.867
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.867
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.867
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.867
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.866
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.865
MDP0000272980 Malus domestica MDP0000272980 I 0.865
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.865
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.864
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.864
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.863
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.863
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.859
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.859
Bo3g071560 Brassica oleracea Bo3g071560 I 0.858
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.857
MDP0000173048 Malus domestica MDP0000173048 I 0.856
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.855
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.854
F775_01923 Aegilops tauschii F775_01923 I 0.854
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.854
30167.m000856 Ricinus communis 30167.m000856 I 0.853
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.853
Cla002355 Citrullus lanatus Cla002355 I 0.853
Cla018797 Citrullus lanatus Cla018797 N 0.852
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.852
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.852
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.852
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.850
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.850
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.850
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.848
Si015230m.g Setaria italica Si015230m.g I 0.847
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.846
PK12240.1 Cannabis sativa PK12240.1 D 0.845
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.844
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.844
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.844
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.844
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.843
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.843
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.842
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.841
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.841
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.840
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.840
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.840
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.840
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.839
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.838
OBART08G15630 Oryza barthii OBART08G15630 N 0.838
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.837
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.837
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.837
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.837
OS08G0432300 Oryza sativa OS08G0432300 I 0.837
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.835
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.835
OS09G0410500 Oryza sativa OS09G0410500 I 0.835
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.835
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.835
TCM_011874 Theobroma cacao TCM_011874 I 0.835
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.835
OBART09G10040 Oryza barthii OBART09G10040 I 0.835
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.834
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.834
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.833
TB1 Oryza sativa OS03G0706500 D 0.833
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.833
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.833
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.833
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.833
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.833
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.831
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.830
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.830
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.830
mgf026636m Mimulus guttatus mgf026636m I 0.829
Pm015499 Prunus mume Pm015499 I 0.829
PK16683.1 Cannabis sativa PK16683.1 N 0.828
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.828
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.827
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.827
Bra004097 Brassica rapa Bra004097 I 0.826
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.825
Si033183m.g Setaria italica Si033183m.g I 0.825
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.824
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.824
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.824
PK19717.1 Cannabis sativa PK19717.1 D 0.823
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.823
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.822
Cla016709 Citrullus lanatus Cla016709 I 0.822
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.822
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.822