CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR09G06870
(
Leersia perrieri
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
LPERR09G06870
T344009_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS
SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.841
0.518
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM
KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.829
0.553
For this family, TFs with SR scores >
0.822
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR09G06870.1
TCP
110
216
PFRTDRHSKIRTAQGVRDRRMRLSLDVARDFFALQDRLGFDKASKTVDWLLTQSKPAIDRLAADNSSSSDHHHQIGAGSDKGGGGGDPQEKAAAHAQQLEEDQLGCE
Links
Other
TCP
family TFs
Other
Leersia perrieri
TFs
130 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OS09G0410500
Oryza sativa
OS09G0410500
I
0.969
OGLUM09G10300
Oryza glumaepatula
OGLUM09G10300
I
0.969
OBART09G10040
Oryza barthii
OBART09G10040
I
0.969
ONIVA09G09540
Oryza nivara
ONIVA09G09540
I
0.968
BGIOSGA030744
Oryza indica
BGIOSGA030744
I
0.968
ORUFI09G10660
Oryza rufipogon
ORUFI09G10660
I
0.968
OPUNC09G08520
Oryza punctata
OPUNC09G08520
I
0.962
Pavir.Ba01820
Panicum virgatum
Pavir.Ba01820
I
0.962
GRMZM2G064628
Zea mays
GRMZM2G064628
I
0.962
Si033183m.g
Setaria italica
Si033183m.g
I
0.962
Sb02g024450
Sorghum bicolor
Sb02g024450
I
0.961
OMERI09G07770
Oryza meridionalis
OMERI09G07770
I
0.960
Pavir.Bb02154
Panicum virgatum
Pavir.Bb02154
I
0.958
GRMZM2G110242
Zea mays
GRMZM2G110242
I
0.949
GRMZM2G060319
Zea mays
GRMZM2G060319
I
0.947
BRADI3G36590
Brachypodium distachyon
BRADI3G36590
N
0.947
Sb07g021140
Sorghum bicolor
Sb07g021140
I
0.945
Si015230m.g
Setaria italica
Si015230m.g
I
0.945
BRADI4G29980
Brachypodium distachyon
BRADI4G29980
I
0.944
GRMZM2G166687
Zea mays
GRMZM2G166687
I
0.943
MLOC_58142
Hordeum vulgare
MLOC_58142
I
0.943
Traes_5BL_19F383CC71
Triticum aestivum
Traes_5BL_19F383CC71
I
0.939
Traes_5DL_46A3B0DAB1
Triticum aestivum
Traes_5DL_46A3B0DAB1
I
0.938
OPUNC08G13710
Oryza punctata
OPUNC08G13710
I
0.938
MLOC_4614
Hordeum vulgare
MLOC_4614
I
0.937
F775_01923
Aegilops tauschii
F775_01923
I
0.934
LPERR08G12880
Leersia perrieri
LPERR08G12880
I
0.933
TRIUR3_20728
Triticum urartu
TRIUR3_20728
I
0.930
GRMZM2G055024
Zea mays
GRMZM2G055024
I
0.930
ORGLA08G0137200
Oryza glaberrima
ORGLA08G0137200
I
0.929
GRMZM2G031905
Zea mays
GRMZM2G031905
I
0.925
Pavir.Fb01590
Panicum virgatum
Pavir.Fb01590
I
0.924
ONIVA08G16720
Oryza nivara
ONIVA08G16720
I
0.924
GRMZM2G062711
Zea mays
GRMZM2G062711
I
0.921
OMERI08G12900
Oryza meridionalis
OMERI08G12900
I
0.920
OGLUM08G16380
Oryza glumaepatula
OGLUM08G16380
I
0.919
Pavir.Fa00870
Panicum virgatum
Pavir.Fa00870
I
0.916
OS08G0432300
Oryza sativa
OS08G0432300
I
0.914
ORUFI08G17540
Oryza rufipogon
ORUFI08G17540
I
0.914
BGIOSGA028717
Oryza indica
BGIOSGA028717
I
0.914
OBART08G15630
Oryza barthii
OBART08G15630
N
0.903
evm.TU.supercontig_179.29
Carica papaya
evm.TU.supercontig_179.29
I
0.890
Pavir.Ib04362
Panicum virgatum
Pavir.Ib04362
I
0.868
cassava32886.m1
Manihot esculenta
cassava32886.m1
I
0.866
Pavir.Ia00838
Panicum virgatum
Pavir.Ia00838
I
0.864
Si038692m.g
Setaria italica
Si038692m.g
I
0.863
30167.m000856
Ricinus communis
30167.m000856
I
0.858
mgf022233m
Mimulus guttatus
mgf022233m
I
0.853
GSMUA_Achr2G22480_001
Musa acuminata
GSMUA_Achr2G22480_001
I
0.852
Gorai.007G007500
Gossypium raimondii
Gorai.007G007500
I
0.849
MDP0000224810
Malus domestica
MDP0000224810
N
0.849
Bostr.19424s0807
Boechera stricta
Bostr.19424s0807
I
0.849
cassava9378.m1
Manihot esculenta
cassava9378.m1
I
0.848
30174.m008721
Ricinus communis
30174.m008721
I
0.848
Bo5g117410
Brassica oleracea
Bo5g117410
N
0.847
mgf026636m
Mimulus guttatus
mgf026636m
I
0.847
PDK_20s1689851g001
Phoenix dactylifera
PDK_20s1689851g001
I
0.847
chr4.LjB15O07.110.nc
Lotus japonicus
chr4.LjB15O07.110.nc
I
0.846
POPTR_0012s05660
Populus trichocarpa
POPTR_0012s05660
I
0.846
Solyc04g006980.1
Solanum lycopersicum
Solyc04g006980.1
I
0.846
PGSC0003DMG400005705
Solanum tuberosum
PGSC0003DMG400005705
I
0.846
LPERR03G25950
Leersia perrieri
LPERR03G25950
I
0.846
ORGLA03G0289500
Oryza glaberrima
ORGLA03G0289500
I
0.846
OMERI03G27910
Oryza meridionalis
OMERI03G27910
I
0.846
OBART03G31290
Oryza barthii
OBART03G31290
I
0.846
Carubv10013748m.g
Capsella rubella
Carubv10013748m.g
I
0.845
Cagra.1681s0023
Capsella grandiflora
Cagra.1681s0023
I
0.845
SapurV1A.0301s0010
Salix purpurea
SapurV1A.0301s0010
I
0.843
SapurV1A.0583s0060
Salix purpurea
SapurV1A.0583s0060
I
0.842
SapurV1A.1895s0010
Salix purpurea
SapurV1A.1895s0010
I
0.842
SapurV1A.1895s0020
Salix purpurea
SapurV1A.1895s0020
I
0.842
Thhalv10021948m.g
Eutrema salsugineum
Thhalv10021948m.g
N
0.842
PGSC0003DMG400007467
Solanum tuberosum
PGSC0003DMG400007467
I
0.841
SapurV1A.0682s0140
Salix purpurea
SapurV1A.0682s0140
I
0.841
PK12240.1
Cannabis sativa
PK12240.1
D
0.841
AC233950.1_FG002
Zea mays
AC233950.1_FG002
I
0.840
POPTR_0015s03140
Populus trichocarpa
POPTR_0015s03140
I
0.839
PGSC0003DMG400003362
Solanum tuberosum
PGSC0003DMG400003362
I
0.837
gene03882-v1.0-hybrid
Fragaria vesca
gene03882-v1.0-hybrid
I
0.837
Eucgr.K02654
Eucalyptus grandis
Eucgr.K02654
I
0.837
GLYMA04G22407
Glycine max
GLYMA04G22407
I
0.837
GSMUA_Achr2G21050_001
Musa acuminata
GSMUA_Achr2G21050_001
I
0.835
Bo3g071560
Brassica oleracea
Bo3g071560
I
0.834
BRC1
Arabidopsis thaliana
AT3G18550
I
0.834
Cla018797
Citrullus lanatus
Cla018797
N
0.833
Traes_2AS_1A307CE26
Triticum aestivum
Traes_2AS_1A307CE26
N
0.833
Sb01g010690
Sorghum bicolor
Sb01g010690
I
0.833
Eucgr.B00699
Eucalyptus grandis
Eucgr.B00699
I
0.833
BRADI1G11060
Brachypodium distachyon
BRADI1G11060
I
0.833
Cla019282
Citrullus lanatus
Cla019282
N
0.832
GLYMA05G07943
Glycine max
GLYMA05G07943
I
0.831
Cla016709
Citrullus lanatus
Cla016709
I
0.831
Thhalv10019499m.g
Eutrema salsugineum
Thhalv10019499m.g
I
0.830
Carubv10020487m.g
Capsella rubella
Carubv10020487m.g
I
0.829
Cagra.1157s0001
Capsella grandiflora
Cagra.1157s0001
I
0.829
Bostr.26959s0002
Boechera stricta
Bostr.26959s0002
I
0.829
PRUPE_ppa015026mg
Prunus persica
PRUPE_ppa015026mg
I
0.829
BRC2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2000933
I
0.829
TB1
Oryza sativa
OS03G0706500
D
0.829
MLOC_70116
Hordeum vulgare
MLOC_70116
I
0.829
OGLUM03G31540
Oryza glumaepatula
OGLUM03G31540
I
0.829
ONIVA03G32600
Oryza nivara
ONIVA03G32600
I
0.829
PRUPE_ppa027156mg
Prunus persica
PRUPE_ppa027156mg
I
0.829
ORUFI03G32570
Oryza rufipogon
ORUFI03G32570
I
0.829
BGIOSGA013417
Oryza indica
BGIOSGA013417
I
0.829
TRIUR3_31795
Triticum urartu
TRIUR3_31795
I
0.829
Pm015499
Prunus mume
Pm015499
I
0.829
Pm030202
Prunus mume
Pm030202
I
0.829
Traes_4AL_75D069945
Triticum aestivum
Traes_4AL_75D069945
I
0.829
BRC2
Arabidopsis thaliana
AT1G68800
I
0.829
Traes_4BS_DC076554D
Triticum aestivum
Traes_4BS_DC076554D
I
0.829
Traes_4DS_59A46B69A
Triticum aestivum
Traes_4DS_59A46B69A
I
0.829
GRMZM2G458087
Zea mays
GRMZM2G458087
N
0.828
MTR_7g018500
Medicago truncatula
MTR_7g018500
I
0.828
Bo2g055640
Brassica oleracea
Bo2g055640
I
0.827
OPUNC03G28490
Oryza punctata
OPUNC03G28490
I
0.827
orange1.1g035911m.g
Citrus sinensis
orange1.1g035911m.g
I
0.827
Solyc03g119770.2
Solanum lycopersicum
Solyc03g119770.2
I
0.827
Ciclev10024246m.g
Citrus clementina
Ciclev10024246m.g
I
0.827
TCM_012252
Theobroma cacao
TCM_012252
I
0.827
Bra001710
Brassica rapa
Bra001710
I
0.826
Traes_2BS_03909B330
Triticum aestivum
Traes_2BS_03909B330
N
0.826
BRC1
Arabidopsis lyrata
scaffold_302193.1
N
0.826
POPTR_0017s13980
Populus trichocarpa
POPTR_0017s13980
I
0.826
TCM_019518
Theobroma cacao
TCM_019518
I
0.826
MTR_4g111935
Medicago truncatula
MTR_4g111935
I
0.825
mgf019480m
Mimulus guttatus
mgf019480m
I
0.825
Cagra.1125s0016
Capsella grandiflora
Cagra.1125s0016
I
0.823
Solyc06g069240.1
Solanum lycopersicum
Solyc06g069240.1
N
0.823
PGSC0003DMG400004054
Solanum tuberosum
PGSC0003DMG400004054
N
0.823