OBART03G31290 (Oryza barthii)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 OBART03G31290 T344069_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.974 0.899
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS

SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.823 0.392
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART03G31290.1 TCP 109 268

Links

Other TCP family TFs
Other Oryza barthii TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.983
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.980
TB1 Oryza sativa OS03G0706500 D 0.974
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.974
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.974
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.974
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.974
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.964
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.961
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.958
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.956
Si038692m.g Setaria italica Si038692m.g I 0.952
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.934
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.934
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.932
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.932
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.932
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.932
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.931
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.926
AC190734.2_FG003 Zea mays AC190734.2_FG003 I 0.908
OB03G38320 Oryza brachyantha OB03G38320 I 0.901
OS09G0410500 Oryza sativa OS09G0410500 I 0.858
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.858
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.858
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.858
OBART09G10040 Oryza barthii OBART09G10040 I 0.858
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.858
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.855
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.854
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.853
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.851
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.849
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.848
Si015230m.g Setaria italica Si015230m.g I 0.846
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.846
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.846
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.843
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.843
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.842
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.842
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.841
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.841
MDP0000224810 Malus domestica MDP0000224810 N 0.841
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.841
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.839
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.839
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.839
Si033183m.g Setaria italica Si033183m.g I 0.839
F775_01923 Aegilops tauschii F775_01923 I 0.836
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.836
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.835
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.834
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.834
Bo3g071560 Brassica oleracea Bo3g071560 I 0.833
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.832
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.832
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.831
GSMUA_Achr10G25520_001 Musa acuminata GSMUA_Achr10G25520_001 I 0.831
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.831
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.830
Bo1g117490 Brassica oleracea Bo1g117490 I 0.829
Bra037579 Brassica rapa Bra037579 I 0.829
BRC1 Arabidopsis thaliana AT3G18550 I 0.829
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.829
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.828
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.828
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.828
OS08G0432300 Oryza sativa OS08G0432300 I 0.828
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.828
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.828
Pm030202 Prunus mume Pm030202 I 0.827
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.827
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.827
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.826
30174.m008721 Ricinus communis 30174.m008721 I 0.826
PK12240.1 Cannabis sativa PK12240.1 D 0.823
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.823