Si015230m.g (Setaria italica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Si015230m.g T344385_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TB1
M01312_2.00 		Oryza sativa
GGSCCCCCYM
KRGGGGGSCC		 PBM
Lambert et al.(2019)
pTH8740 		0.850 0.500
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si015230m TCP 78 210

Links

Other TCP family TFs
Other Setaria italica TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.968
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.962
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.961
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.958
OS09G0410500 Oryza sativa OS09G0410500 I 0.952
OBART09G10040 Oryza barthii OBART09G10040 I 0.952
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.952
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.952
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.952
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.952
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.950
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.949
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.947
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.946
F775_01923 Aegilops tauschii F775_01923 I 0.946
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.946
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.945
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.944
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.944
Si033183m.g Setaria italica Si033183m.g I 0.941
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.941
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.941
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.936
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.935
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.934
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.933
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.931
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.929
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.929
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.928
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.923
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.919
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.918
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.914
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.910
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.910
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.909
OS08G0432300 Oryza sativa OS08G0432300 I 0.909
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.909
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.907
OBART08G15630 Oryza barthii OBART08G15630 N 0.889
GRMZM2G458087 Zea mays GRMZM2G458087 N 0.881
GRMZM2G414114 Zea mays GRMZM2G414114 N 0.877
30174.m008721 Ricinus communis 30174.m008721 I 0.874
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.866
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.865
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.863
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.862
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.861
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.861
Pm015499 Prunus mume Pm015499 I 0.860
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.860
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.858
Bo5g117410 Brassica oleracea Bo5g117410 N 0.857
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.857
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.854
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.854
AC234521.1_FG006 Zea mays AC234521.1_FG006 N 0.853
Bo3g071560 Brassica oleracea Bo3g071560 I 0.852
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.852
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.852
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.851
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.850
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.850
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.850
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.850
TB1 Oryza sativa OS03G0706500 D 0.850
TCM_012252 Theobroma cacao TCM_012252 I 0.847
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.846
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.846
OBART03G31290 Oryza barthii OBART03G31290 I 0.846
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.846
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.846
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.845
TCM_019518 Theobroma cacao TCM_019518 I 0.845
Bra001710 Brassica rapa Bra001710 I 0.845
BRC1 Arabidopsis thaliana AT3G18550 I 0.845
Traes_2BS_03909B330 Triticum aestivum Traes_2BS_03909B330 N 0.845
Traes_2DS_4C8E5F416 Triticum aestivum Traes_2DS_4C8E5F416 N 0.845
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.842
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.842
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.841
Traes_2AS_1A307CE26 Triticum aestivum Traes_2AS_1A307CE26 N 0.838
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.838
Cla019282 Citrullus lanatus Cla019282 N 0.838
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.837
mgf022233m Mimulus guttatus mgf022233m I 0.837
Si038692m.g Setaria italica Si038692m.g I 0.836
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.833
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.833
MDP0000224810 Malus domestica MDP0000224810 N 0.833
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.833
Pm030202 Prunus mume Pm030202 I 0.833
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.833
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.833
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.833
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.832
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.829
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.828
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.828
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.827
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.826
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.826
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.826
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.826
GRMZM2G135461 Zea mays GRMZM2G135461 N 0.826
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.826
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.826
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.826
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.825
GRMZM2G359599 Zea mays GRMZM2G359599 N 0.823
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.823
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.823
Cla016709 Citrullus lanatus Cla016709 I 0.823
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.822