Pm015499 (Prunus mume)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Pm015499 T344558_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.872 0.419
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.866 0.426
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.866 0.473
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm015499 TCP 132 279

Links

Other TCP family TFs
Other Prunus mume TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.981
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.909
30167.m000856 Ricinus communis 30167.m000856 I 0.908
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.903
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.902
Bra034010 Brassica rapa Bra034010 I 0.901
Cla016709 Citrullus lanatus Cla016709 I 0.898
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.895
Bo6g103670 Brassica oleracea Bo6g103670 I 0.895
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.894
Bo2g055640 Brassica oleracea Bo2g055640 I 0.894
TCM_019518 Theobroma cacao TCM_019518 I 0.893
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.892
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.892
Bra004097 Brassica rapa Bra004097 I 0.890
Bra004212 Brassica rapa Bra004212 I 0.888
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.883
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.881
MDP0000272980 Malus domestica MDP0000272980 I 0.877
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.877
30174.m008721 Ricinus communis 30174.m008721 I 0.877
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.876
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.876
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.876
Bo6g099040 Brassica oleracea Bo6g099040 I 0.875
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.874
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.873
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.872
TCP1 Arabidopsis thaliana AT1G67260 D 0.872
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.872
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.871
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.871
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.870
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.870
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.869
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.869
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.869
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.869
BRC2 Arabidopsis thaliana AT1G68800 I 0.869
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.869
Pm030202 Prunus mume Pm030202 I 0.868
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.868
PK19717.1 Cannabis sativa PK19717.1 D 0.866
PK12240.1 Cannabis sativa PK12240.1 D 0.866
Pm029002 Prunus mume Pm029002 I 0.865
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.865
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.864
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.864
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.864
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.863
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.862
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.861
Si015230m.g Setaria italica Si015230m.g I 0.860
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.860
mgf024687m Mimulus guttatus mgf024687m I 0.860
F775_01923 Aegilops tauschii F775_01923 I 0.860
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.859
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.859
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.858
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.858
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.858
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.858
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.858
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.858
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.857
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.857
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.856
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.856
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.856
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.856
mgf022233m Mimulus guttatus mgf022233m I 0.855
Cla007227 Citrullus lanatus Cla007227 I 0.854
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.853
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.852
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.852
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.852
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.851
29738.m001041 Ricinus communis 29738.m001041 I 0.851
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.850
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.849
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.849
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.848
MDP0000173048 Malus domestica MDP0000173048 I 0.847
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.847
mgf026636m Mimulus guttatus mgf026636m I 0.847
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.847
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.846
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.845
Cla002355 Citrullus lanatus Cla002355 I 0.845
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.844
GLYMA08G28691 Glycine max GLYMA08G28691 I 0.844
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.844
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.843
TCM_011874 Theobroma cacao TCM_011874 I 0.843
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.843
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.843
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.843
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.841
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.841
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.840
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.839
mgf019480m Mimulus guttatus mgf019480m I 0.839
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.838
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.838
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.837
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.837
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.836
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.836
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.836
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.836
OS09G0410500 Oryza sativa OS09G0410500 I 0.836
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.836
OBART09G10040 Oryza barthii OBART09G10040 I 0.836
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.835
Bra038350 Brassica rapa Bra038350 I 0.835
Bo2g061250 Brassica oleracea Bo2g061250 I 0.835
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.834
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.833
Cla018797 Citrullus lanatus Cla018797 N 0.833
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.833
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.833
OS08G0432300 Oryza sativa OS08G0432300 I 0.833
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.833
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.832
Cla019282 Citrullus lanatus Cla019282 N 0.832
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.832
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.832
MDP0000224810 Malus domestica MDP0000224810 N 0.831
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.831
TCM_012252 Theobroma cacao TCM_012252 I 0.829
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.829
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.829
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.829
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.829
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.829
Si033183m.g Setaria italica Si033183m.g I 0.829
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.829
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.828
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.827
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.824
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.823
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.822
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.822