GLYMA08G28691 (Glycine max)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GLYMA08G28691 T343872_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.921 0.485
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.879 0.448
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.876 0.500
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA08G28691.1 TCP 97 230

Links

Other TCP family TFs
Other Glycine max TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.974
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.951
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.949
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.946
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.944
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.944
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.943
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.940
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.939
PK12240.1 Cannabis sativa PK12240.1 D 0.921
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.920
29738.m001041 Ricinus communis 29738.m001041 I 0.919
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.918
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.918
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.917
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.917
Cla016709 Citrullus lanatus Cla016709 I 0.916
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.914
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.913
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.912
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.910
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.910
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.909
Bra004212 Brassica rapa Bra004212 I 0.908
BRC2 Arabidopsis thaliana AT1G68800 I 0.905
mgf019480m Mimulus guttatus mgf019480m I 0.903
30167.m000856 Ricinus communis 30167.m000856 I 0.903
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.899
Cla007227 Citrullus lanatus Cla007227 I 0.898
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.897
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.897
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.897
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.897
Bra004097 Brassica rapa Bra004097 I 0.897
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.895
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.893
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.892
TCM_019518 Theobroma cacao TCM_019518 I 0.891
Bo6g099040 Brassica oleracea Bo6g099040 I 0.891
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.890
Bo6g103670 Brassica oleracea Bo6g103670 I 0.890
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.888
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.888
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.888
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.886
Bo2g055640 Brassica oleracea Bo2g055640 I 0.886
Cla002355 Citrullus lanatus Cla002355 I 0.886
MDP0000272980 Malus domestica MDP0000272980 I 0.886
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.886
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.884
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.883
Bra034010 Brassica rapa Bra034010 I 0.883
MDP0000173048 Malus domestica MDP0000173048 I 0.880
TCP1 Arabidopsis thaliana AT1G67260 D 0.879
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.879
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.878
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.878
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.878
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.878
TCM_011874 Theobroma cacao TCM_011874 I 0.877
PK19717.1 Cannabis sativa PK19717.1 D 0.876
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.876
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.874
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.872
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.869
mgf022233m Mimulus guttatus mgf022233m I 0.868
Bra038350 Brassica rapa Bra038350 I 0.867
Bo2g061250 Brassica oleracea Bo2g061250 I 0.867
Pm029002 Prunus mume Pm029002 I 0.867
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.867
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.867
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.866
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.854
mgf026636m Mimulus guttatus mgf026636m I 0.850
Pm015499 Prunus mume Pm015499 I 0.844
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.844
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.838
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.833
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.833
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.831
Lus10003078.g Linum usitatissimum Lus10003078.g I 0.830
Lus10034072.g Linum usitatissimum Lus10034072.g I 0.826
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.825