GLYMA19G05921 (Glycine max)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GLYMA19G05921 T343902_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.887 0.418
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.876 0.437
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.861 0.380
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA19G05921.1 TCP 102 270

Links

Other TCP family TFs
Other Glycine max TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.981
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.958
GLYMA08G28691 Glycine max GLYMA08G28691 I 0.946
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.945
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.943
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.941
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.936
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.934
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.926
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.923
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.918
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.918
29738.m001041 Ricinus communis 29738.m001041 I 0.911
Cla007227 Citrullus lanatus Cla007227 I 0.906
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.906
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.906
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.904
30167.m000856 Ricinus communis 30167.m000856 I 0.903
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.900
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.900
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.899
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.899
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.898
Cla016709 Citrullus lanatus Cla016709 I 0.898
TCM_019518 Theobroma cacao TCM_019518 I 0.898
MDP0000173048 Malus domestica MDP0000173048 I 0.897
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.897
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.896
Pm029002 Prunus mume Pm029002 I 0.896
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.895
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.895
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.892
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.891
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.891
Bra004212 Brassica rapa Bra004212 I 0.890
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.889
Cla002355 Citrullus lanatus Cla002355 I 0.888
TCM_011874 Theobroma cacao TCM_011874 I 0.888
MDP0000272980 Malus domestica MDP0000272980 I 0.887
PK12240.1 Cannabis sativa PK12240.1 D 0.887
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.886
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.886
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.886
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.885
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.884
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.883
BRC2 Arabidopsis thaliana AT1G68800 I 0.882
mgf019480m Mimulus guttatus mgf019480m I 0.882
Bo6g103670 Brassica oleracea Bo6g103670 I 0.881
Bo2g061250 Brassica oleracea Bo2g061250 I 0.881
Bra038350 Brassica rapa Bra038350 I 0.881
Bra034010 Brassica rapa Bra034010 I 0.880
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.880
Bo6g099040 Brassica oleracea Bo6g099040 I 0.877
PK19717.1 Cannabis sativa PK19717.1 D 0.876
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.876
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.876
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.876
Bra004097 Brassica rapa Bra004097 I 0.874
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.873
Bo2g055640 Brassica oleracea Bo2g055640 I 0.872
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.869
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.869
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.864
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.864
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.864
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.864
Pm015499 Prunus mume Pm015499 I 0.864
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.862
mgf022233m Mimulus guttatus mgf022233m I 0.862
TCP1 Arabidopsis thaliana AT1G67260 D 0.861
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.851
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.848
mgf026636m Mimulus guttatus mgf026636m I 0.846
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.844
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.843
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.841
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.837
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.836
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.832
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.828
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.828
Lus10003078.g Linum usitatissimum Lus10003078.g I 0.826
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.823
Pm030202 Prunus mume Pm030202 I 0.822
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.822